Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g05841 ATGCGAGCAATTACATCTGAGGGCAAGACTGAAATCTTTTATCTGCAAGAGAGTTACACAGACTCCACAGGTTTCTACGTGGTTTATGCTCCACTAGATGAGCAAGCTTTATTAGCTCTTTCAAAAGGATGCAACCCAGACAATGTAATTGTCCTTCCATCAGGGTTTGCTATTCTCCCTGGAGGGTTACCAGTAGAGGGTGAAGGAAAAGATAGAAGCACTAACACTGGCACTGGAAGTCTTCTAACTGTTGGATTCAATATCATTGATTGGTCCATCACTAATGAGACACCTATCACTCTTGAATCAGTTCAAGCCATCTATGGCGTTATTGCAGATACTGTTAGCGCTATAAAGGATGCGGTGCAATATCATAATCGACTCAACAATTGGATGAATGAAGAATGA 408 0.4142 MRAITSEGKTEIFYLQESYTDSTGFYVVYAPLDEQALLALSKGCNPDNVIVLPSGFAILPGGLPVEGEGKDRSTNTGTGSLLTVGFNIIDWSITNETPITLESVQAIYGVIADTVSAIKDAVQYHNRLNNWMNEE. 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g05841 135 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 6 123 IPR042160 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g05841 Seca-Chr4 111885005 111885491 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g05841 9 122 Homeobox Transcription Factor Family AT4G04890 42.149 2.78e-18 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g05841 K09338 - gsj:114374332 152.525