Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca4g05812 | ATGTACCACCGTAGATTCAACGCCCAATCATTATATGTCGCTGACCCAGATGAGCCCGAGCCCGAGCCCATCTCAGAAGCCGGGCCTGCTTCTCCTTCTTCCGGTGACGACACAAAAACTGAAGGACCATCACCCAAAAAAAGGAGGGAGATGAAGAAGAGGGTGGTGACTATACCGATCGGTGACGTGGATGGATCTAAGAGTAAAGGAGAGACATATCCACCGTCTGATTCGTGGGCCTGGAGGAAGTACGGCCAGAAGCCCATCAAGGGCTCCCCTTATCCCAGAGGGGATACTACCGATGCAGTAGTTCAAAGGGGTGCCCCGCCAGGAAGCAAGTTGAGAGAAGCCGCGTGGACCCCACAAAGCTCATCGTCACCTACGCCTATGAACACAACCACTCCCTCCCTCTCCCCAAATCTCATTCCTCCTCCTCCGCCGTCGTCGCCGCCGTCGACGGCGACGCCGCCAGTCCCTCGCTCGCCGAGTCCGTCTCCAAATTTCCGCCGGAGGAGTTGA | 519 | 0.5703 | MYHRRFNAQSLYVADPDEPEPEPISEAGPASPSSGDDTKTEGPSPKKRREMKKRVVTIPIGDVDGSKSKGETYPPSDSWAWRKYGQKPIKGSPYPRGDTTDAVVQRGAPPGSKLREAAWTPQSSSSPTPMNTTTPSLSPNLIPPPPPSSPPSTATPPVPRSPSPSPNFRRRS. | 173 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca4g05812 | 172 | SUPERFAMILY | WRKY DNA-binding domain | 71 | 97 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Seca4g05812 | 172 | ProSiteProfiles | WRKY domain profile. | 76 | 116 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Seca4g05812 | 172 | PANTHER | WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED | 23 | 97 | IPR044810 | GO:0003700 | |
Seca4g05812 | 172 | MobiDBLite | consensus disorder prediction | 138 | 164 | - | - | |
Seca4g05812 | 172 | MobiDBLite | consensus disorder prediction | 117 | 137 | - | - | |
Seca4g05812 | 172 | MobiDBLite | consensus disorder prediction | 1 | 172 | - | - | |
Seca4g05812 | 172 | Gene3D | WRKY domain | 49 | 105 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Seca4g05812 | 172 | Pfam | WRKY DNA -binding domain | 77 | 96 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Seca4g05812 | 172 | SMART | WRKY_cls | 75 | 123 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca4g05812 | Seca-Chr4 | 111262761 | 111265840 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca4g05812 | 3 | 97 | WRKY Transcription Factor Family | AT3G58710 | 62.105 | 1.23e-34 | 120 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Seca4g05812 | WRKY | 5.6e-06 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca4g05812 | - | - | cam:101504205 | 173.326 |