Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g05795 ATGTCAGCTAGTGTCTCGAAGGGTAATGATGCAGTCACTGGTCACTTAATATCAACCACAATCAGAGGGAAAAATGTTGAACCTAAGCAGAACATCAGTTACATGGCAGAACGTGTTGTTGGTCCTGGATCATTTGGAATTGTTTTCCAGGCAAAGTGCTTGGAGACTGGGGAGGCAGTTGCTATAAAGAAGGTCTTGCAGGACAAGCGGTACAAAAATCGGGAATTGCAGTTAATGCGTGTGATGGATCATCCAAATTTAATTTCCCCGAAGCATTACTTCTTCTCTACAACAAGAAAAGATGATCTATTACAACAAGAAAAAATGATCTATGTCCCTGAGACAATGTACCGAGTTCTAAAGCACTACAATAGCATCAACCAAAGAATGCCTTCAGCGAGTCATTCTCGGATTGCGGTTGTAGCAACAACTGCAGCTAGTGCTGCTGAGGTGGCGGTAGCAACAGAGGTGCTGGTTGCGGTGGTTGAAGGTGGTGCGGCCCCAACGGCATAG 513 0.4503 MSASVSKGNDAVTGHLISTTIRGKNVEPKQNISYMAERVVGPGSFGIVFQAKCLETGEAVAIKKVLQDKRYKNRELQLMRVMDHPNLISPKHYFFSTTRKDDLLQQEKMIYVPETMYRVLKHYNSINQRMPSASHSRIAVVATTAASAAEVAVATEVLVAVVEGGAAPTA. 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g05795 170 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 3 133 - -
Seca4g05795 170 ProSiteProfiles Protein kinase domain profile. 34 170 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca4g05795 170 SUPERFAMILY Protein kinase-like (PK-like) 33 106 IPR011009 -
Seca4g05795 170 Pfam Protein kinase domain 34 117 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca4g05795 170 Gene3D Phosphorylase Kinase; domain 1 19 113 - -
Seca4g05795 170 FunFam Glycogen synthase kinase-3 beta 18 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g05795 Seca-Chr4 110892659 110899387 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g05795 34 135 MAP Kinase Gene Family AT2G01450 34.862 7.38e-10 55.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Seca4g05795 Pkinase 3.2e-09 CL0016