Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g05792 ATGTCACACCCCCTCGATTGTGTATCTTTTAGACCTGAGACAAAGGCAAAGTGCTTGGAGACTGGGAAGGCAGTTGCTATAAAGAAGATCATCTATGTCCCTGAGACAATGTACCGAGTTCTAAAGCACTACAATAGCATCAACCAAAGAATGCCTTCAGCGTGTCATTCTCGGATTGCGATTGTGGCAACAACTGAAGCTGTTGCTGCTGGGGTGGCAGTAGCACCAGAGGACATGTCAGCTAGTGTCTCGAAGGGTAATCATGCAGTCACTGGTCACTTAGTATCAACCACAATCAGAGGGAAAAATGTTGAACCTAAATGGGTTCGAACCATCAGTTACATCGCAGAACGTGTTGTTGGCCCTGGATCATTTGGAATTGTTTTCCAGGCAAAGTGCTTGGAGACTGGGGAGGCAGTTGCTATAAAGAAGGTCTTTCAGGACAAGCGATACAAAAATCGTGAATTGCAGTTAATGCGTGTGATGGATCATCCAAATTTAATTTCCCTTAAGCATTACTTCTTCTCTACAACAAGCAAAGATGATCTATGTCCTTGA 558 0.4409 MSHPLDCVSFRPETKAKCLETGKAVAIKKIIYVPETMYRVLKHYNSINQRMPSACHSRIAIVATTEAVAAGVAVAPEDMSASVSKGNHAVTGHLVSTTIRGKNVEPKWVRTISYIAERVVGPGSFGIVFQAKCLETGEAVAIKKVFQDKRYKNRELQLMRVMDHPNLISLKHYFFSTTSKDDLCP. 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g05792 185 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 78 183 - -
Seca4g05792 185 SUPERFAMILY Protein kinase-like (PK-like) 107 179 IPR011009 -
Seca4g05792 185 Pfam Protein kinase domain 116 176 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca4g05792 185 FunFam Glycogen synthase kinase-3 beta 96 184 - -
Seca4g05792 185 ProSiteProfiles Protein kinase domain profile. 114 185 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca4g05792 185 Gene3D Phosphorylase Kinase; domain 1 99 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g05792 Seca-Chr4 110877095 110880180 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g05792 114 181 MAP Kinase Gene Family AT2G01450 39.189 1.27e-08 51.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Seca4g05792 Pkinase 2.8e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g05792 K14502 - ini:109188312 174.096