Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g05768 ATGGACTCCATCGACGGAGCTCCGCCGCAAGCCACCGTACCTCCGTCGTATCGGCCGTCTCCGTTCCCCGGACGGGAAGACTGCTGGTCTGAGGAGGCTACGTTCACCCTCGTTGATGCCTGGGGAGAACGCTACATCGAGCTCAACCGCGGCAACCTCCGCCAGAAGCACTGGCAGGAGGTCGCCGACGCCGTCAACGACCGCCACGGCCACGACAGGAAGGCTCGCCGCACCGACGTCCAGTGCAAGAACCGAATCGACACGCTCAAGAAGAAGTACAAGATCGAGAAAGCTAGGGTTTCTGAATCCGGCGGTTACACCGGCACCTGGCCGTTCTTTCGCCGCCTTGATTTCCTCATCGGAGACACTTTTCCGGCGAAGAGGCCGTCGCCGCCGGACGTCAGCAATGAGCGCCGGAACGTCTCTCCCATTAAGTCCCCGGCCTGGGCGCTTGTGCCGGTTGGTCCGCGATCAGCCACTCAGAAGCGGCTGCCGGCGACAGCAACTGAGACGTCCCTGACGAGTGTGGAGAATTCAAACTTCCGGCGGAATTTCTCAGCCTTTGCTGCTGCAGCTGCTGCGGCAGCGAAGGCGGACAGTGAGAATTCAAATGGTTCAAAGTGGAGCAATGGGAGTGGGAAGACGAAGAGGAAGAGGGGAAGGGATTGGGAATTTGGATACAGGGAGGTTGCAGAAGCCTTAGAAAGGTTTGGAGAGATATACGAGAGAGTGGAGACAGCGAAGCAGAGGCAAATGGTGGAGTTGGAGAAACAGAGGATGCAATTTGCTAAGGATCTGGAGTACCAGAGAATGCAGCTCTTCATGGAAACGCAGGTTCAACTGCAAAAAATCAACTGCTCTAAGCGATCTTCTGCATCTGGTGACCCTCTTTTCTTTCTTTCTACTTTTAATGCAAATTTATGTTTCTAA 930 0.557 MDSIDGAPPQATVPPSYRPSPFPGREDCWSEEATFTLVDAWGERYIELNRGNLRQKHWQEVADAVNDRHGHDRKARRTDVQCKNRIDTLKKKYKIEKARVSESGGYTGTWPFFRRLDFLIGDTFPAKRPSPPDVSNERRNVSPIKSPAWALVPVGPRSATQKRLPATATETSLTSVENSNFRRNFSAFAAAAAAAAKADSENSNGSKWSNGSGKTKRKRGRDWEFGYREVAEALERFGEIYERVETAKQRQMVELEKQRMQFAKDLEYQRMQLFMETQVQLQKINCSKRSSASGDPLFFLSTFNANLCF. 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g05768 309 Gene3D - 29 95 - -
Seca4g05768 309 FunFam trihelix transcription factor ASIL2 29 95 - -
Seca4g05768 309 Pfam Myb/SANT-like DNA-binding domain 26 118 IPR044822 -
Seca4g05768 309 MobiDBLite consensus disorder prediction 199 220 - -
Seca4g05768 309 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 15 288 IPR044823 -
Seca4g05768 309 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g05768 Seca-Chr4 110347109 110348038 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g05768 182 284 Trihelix Transcription Factor Family AT3G14180 39.623 9.73e-15 72.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Seca4g05768 Myb_DNA-bind_4 4.5e-26 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g05768 - - gmx:100784918 407.527