Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g05752 ATGGTGGATTCAATGAAGAAGGTTGCAAATCTAGATGTTGAATTGACTGTTGAAGAGCGAAATTTGCTTTCTGTTGGTTATAAGAATGTGATTGGTGCTCGTAGAGCGTCTTGGAGGATCCTGTCTTCCATAGAACAAAAGGAAGAAACTAAAGGAAATGAAGTAAATGCGAAACGAATTAAGGAGTATAGGCAGAAGGTTGAAACAGAGCTATCAAACATCTGTATTGATGTTATGAGAGTTATTGATGAACATCTTATACCTTCAGCTGCAGCTGGTGAATCAACTGTGTTTTACTATAAGATGAAAGGAGATTATTATCGTTATCTGGCAGAATTTAAGACAGGCAATGAGAAGAAGGAGTCTGCTACCACTGCAGCAGAGGCTGATTTGCCTCCCACACATCCCATCCGATTGGGTTTGGCTTTGAATTTCTCAGTTTTCTATTATGAGATCTTGAATTCACCAGAAAGAGCCTGTCATCTTGCAAAGCAAGCTTTTGATGAAGCTATTTCAGAGCTTGACACATTGAATGAGGAATCCTACAAAGATAGCACCTTGATCATGCAACTCCTCAGGGACAACCTGACTTTGTGGACTTCTGACATCCCAGAAGATGGAGGTAATTATTAA 633 0.3965 MVDSMKKVANLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEETKGNEVNAKRIKEYRQKVETELSNICIDVMRVIDEHLIPSAAAGESTVFYYKMKGDYYRYLAEFKTGNEKKESATTAAEADLPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDIPEDGGNY. 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g05752 210 Pfam 14-3-3 protein 1 200 IPR023410 -
Seca4g05752 210 Coils Coil 160 180 - -
Seca4g05752 210 PIRSF 14-3-3 1 209 IPR000308 -
Seca4g05752 210 ProSitePatterns 14-3-3 proteins signature 2. 182 201 IPR023409 -
Seca4g05752 210 PANTHER 14-3-3 PROTEIN 1 203 IPR000308 -
Seca4g05752 210 SMART 1433_4 1 209 IPR023410 -
Seca4g05752 210 ProSitePatterns 14-3-3 proteins signature 1. 20 30 IPR023409 -
Seca4g05752 210 PRINTS 14-3-3 protein zeta signature 146 172 IPR000308 -
Seca4g05752 210 PRINTS 14-3-3 protein zeta signature 14 43 IPR000308 -
Seca4g05752 210 PRINTS 14-3-3 protein zeta signature 173 202 IPR000308 -
Seca4g05752 210 PRINTS 14-3-3 protein zeta signature 119 145 IPR000308 -
Seca4g05752 210 SUPERFAMILY 14-3-3 protein 2 207 IPR036815 -
Seca4g05752 210 Gene3D - 1 208 IPR036815 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g05752 Seca-Chr4 109798341 109801518 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g05752 1 209 14-3-3 family AT2G42590 81.735 1.08e-132 372
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g05752 K06630 - gmx:547990 382.104