Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g05655 ATGTTATCAGATACTTCCCTACTCAGGATTCCTTTCATTTCCTTTCAGGCTCTGAACTTTGCTTTCAAGGATTACTTCAAGAGGCTTTTCAACTTCAAAAAAGATAAAGATGGCTACTGGAAGTGGTTTGCTGGGAATTTGGCATCTGGTGGGGCTGCTGGTGCTTCTTCCCTCTTGTTTGTCTATTCTTTGGACTATGCCCGTACACGGTTAGCTAATGATGCAAAGGCTGCAAAGAAGGGTGGTGAAAGGCAGTTCAATGGCTTGATTGATGTTTACAAGAAAACACTTAAGTCTGATGGTATTGCTGGCCTTTATCGTGGATTCAACATCTCATGTGTTGGAATTATAGTGTATCGTGGTCTTTACTTTGGAATGTATGATTCCCTGAAACCAGTGGTTTTGGTTGGTGGAATGCAGGATAGCTTCTTTGCAAGTTTCTTTTTGGGATGGGGGATCACAATAGGTGCTGGCTTGGCCTCTTACCCAATTGATACTGTCCGAAGGAGGATGATGATGACATCCGGAGAAGCTGTAAAATACAATAGCTCTTTGGATGCTTTCAAGACAATCATCGCAAAAGAGGGTACTAAGTCACTCTTCAAAGGTGCTGGTGCAAACATATTACGTGCTGTTGCAGGTGCTGGGGTGCTTGCTGGTTATGATAAGCTACAGCTCATCATGTTCGGAAAGAAGTATGGTTCTGGTGGAGGTTAA 717 0.431 MLSDTSLLRIPFISFQALNFAFKDYFKRLFNFKKDKDGYWKWFAGNLASGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVVLVGGMQDSFFASFFLGWGITIGAGLASYPIDTVRRRMMMTSGEAVKYNSSLDAFKTIIAKEGTKSLFKGAGANILRAVAGAGVLAGYDKLQLIMFGKKYGSGGG. 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g05655 238 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 13 237 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Seca4g05655 238 ProSiteProfiles Solute carrier (Solcar) repeat profile. 41 133 IPR018108 -
Seca4g05655 238 Gene3D Mitochondrial carrier domain 5 234 IPR023395 -
Seca4g05655 238 ProSiteProfiles Solute carrier (Solcar) repeat profile. 141 227 IPR018108 -
Seca4g05655 238 Pfam Mitochondrial carrier protein 141 228 IPR018108 -
Seca4g05655 238 Pfam Mitochondrial carrier protein 40 133 IPR018108 -
Seca4g05655 238 PRINTS Mitochondrial carrier protein signature 4 24 IPR002067 GO:0055085
Seca4g05655 238 PRINTS Mitochondrial carrier protein signature 56 74 IPR002067 GO:0055085
Seca4g05655 238 PRINTS Mitochondrial carrier protein signature 106 124 IPR002067 GO:0055085
Seca4g05655 238 PRINTS Mitochondrial carrier protein signature 150 172 IPR002067 GO:0055085
Seca4g05655 238 PRINTS Adenine nucleotide translocator signature 41 54 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Seca4g05655 238 PRINTS Adenine nucleotide translocator signature 146 162 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Seca4g05655 238 PRINTS Adenine nucleotide translocator signature 15 27 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Seca4g05655 238 FunFam Uncharacterized protein 82 227 - -
Seca4g05655 238 SUPERFAMILY Mitochondrial carrier 13 223 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g05655 Seca-Chr4 106936878 106939857 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g05655 10 237 Antiporters AT5G13490 88.210 1.53e-132 377
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g05655 K05863 - gmx:100780671 413.305