Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g05652 ATGGCAATGAGGTCTAATGGATTCCTAGGCGTTTTCCTTGTGATCATATCCATGTTGATTCTCAACTCTTCATATCAAGCAACAGCATACAACTTCATCGTTGGTGGCAAGGAAGGGTGGGTGGTGAAGCCTTCTGAAGCCTACAATCACTGGGCTGAGAGAAATAGGTTTCAAGTCAACGACACACTGCATTTCAAATACAACAAAGGATCAGATTCAGTTGCAGTGGTAAATAAGGAGAACTATGATTCGTGCAACCCCAAGAATCCCTTACACGTTATGAACGATGGAGATTCAACGTTCAAATTTGACAAGTCAGGTCCTTTTTTCTTCATCAGCGGCAACGTTGAGAACTGCAAACATGGTCAAAAGCTAATTGTTGTCGTTATGGCTGTCAGACAAAAACAGAGTCAGTCACATTCTCCGGCTGCACATCCGTCTCCGGCACCATCTCCGGCAGAAGCCAAATCTCCGGCGTCACCAGAACCTAGCGTTTCCCCGTCGATCCATGCAGATTCTCCGGCACCATCACCAGCTCGTTCGGGTTCTACGAGGTTCGGTGGCTCTGTTGGTGTTGCTTTGGGTGTTACCGTTGGGGTGGCTTTGTTGTTCAACACCTTTGCTTAG 627 0.4705 MAMRSNGFLGVFLVIISMLILNSSYQATAYNFIVGGKEGWVVKPSEAYNHWAERNRFQVNDTLHFKYNKGSDSVAVVNKENYDSCNPKNPLHVMNDGDSTFKFDKSGPFFFISGNVENCKHGQKLIVVVMAVRQKQSQSHSPAAHPSPAPSPAEAKSPASPEPSVSPSIHADSPAPSPARSGSTRFGGSVGVALGVTVGVALLFNTFA. 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g05652 208 PANTHER BLUE COPPER PROTEIN 28 145 IPR039391 GO:0009055
Seca4g05652 208 Pfam Plastocyanin-like domain 40 123 IPR003245 GO:0009055
Seca4g05652 208 MobiDBLite consensus disorder prediction 161 184 - -
Seca4g05652 208 FunFam Early nodulin-like protein 1 29 134 - -
Seca4g05652 208 Gene3D - 28 134 IPR008972 -
Seca4g05652 208 CDD OsENODL1_like 30 130 IPR041846 -
Seca4g05652 208 SUPERFAMILY Cupredoxins 29 130 IPR008972 -
Seca4g05652 208 ProSiteProfiles Phytocyanin domain profile. 30 131 IPR003245 GO:0009055
Seca4g05652 208 MobiDBLite consensus disorder prediction 137 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g05652 Seca-Chr4 106889804 106890906 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g05652 11 198 Phytocyanin Superfamily AT4G28365 46.842 1.11e-51 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g05652 - - pcin:129312723 198.364