Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g05563 ATGGCGAACGGGTTGGAGATAGAGAGTGGGTTCACCATGTTCAGTGATGATGAGCTGAGTGAGGTGAGTGGGGTGAAGCGAGTTGGGGACTATGTTGAAGTAACGTGTGGGTGTACTAGCCATAGATATGGTGATGCTGTTGGAAGGCTTAGGGTTTTCGTTAATGGGTACCTTGAAATCACTTGTGAATGCACCCCTGGTTGCCAAGAAGACAAGTTGACTCCTGCTGCGTTTGAGAAACACTCTGGAAGAGAGACAGCTAGGAAGTGGAAGAATAATGTGTGGGTAATCGTTAATGGTGAGAAGGTTCCTTTGTTTAAAACAGTGCTGCTGAAATATTACAATCAAGCATCAAGAACTGCTAATGGGTCCCATAGATCCCAAAATGGAAGGGCTTGCCACCGTGATGAGTTTATGCGCTGTACTAGATGTAACAAAGAGCGCAGGTTCCGTCTGAGAACTAAAGAGGAATGCCGCCTTCACCATGATGCTTTGGCAGATCCAAATTGGAAATGTTCTGATCTTCCTTATGACAAAATTACATGTGATGATGAAGAAGAAAGAACAAGTCGCAGAGTTTACAGGGGATGCACTCGTTCTCCAACATGCAAAGGTTGCACTTCATGTGTGTGTTTTGGGTGCGACATATGCCGTTTTTCAGACTGCACTTGCCAGACTTGTATTGACTTTACCAGGAATGCTAAAGCTTGA 711 0.4487 MANGLEIESGFTMFSDDELSEVSGVKRVGDYVEVTCGCTSHRYGDAVGRLRVFVNGYLEITCECTPGCQEDKLTPAAFEKHSGRETARKWKNNVWVIVNGEKVPLFKTVLLKYYNQASRTANGSHRSQNGRACHRDEFMRCTRCNKERRFRLRTKEECRLHHDALADPNWKCSDLPYDKITCDDEEERTSRRVYRGCTRSPTCKGCTSCVCFGCDICRFSDCTCQTCIDFTRNAKA. 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g05563 236 ProSiteProfiles SAND domain profile. 17 121 IPR000770 GO:0003677
Seca4g05563 236 PANTHER PROTEIN ULTRAPETALA 1 12 235 IPR020533 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g05563 Seca-Chr4 104837008 104840557 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF ULT Seca4g05563 SAND 0.00011 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g05563 - - gmx:100796203 475.707