Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g05549 ATGCTATCATGGCTTTTGCAGGGAATTCTCAAGGGAAAATCAGTGACTCGACTCACCACTGTTTCATCCCCACTATTTATTGATAATCAAGCTCGTCCCTCACTCAGAGTTCCTATGTCTCGAAAAATGAATTCTAAGATCTGCGGGCAAGCATATATATATCATTGGTCTGGCTTTCGAATCCCTGCAAATGCTGAGAAACCAGAGTGGTGGTGGAGGACTTTATCCTGTATTCCCTATCTAATAGCATTGCAGATGTCTGCAACTGGGTTTTATCTAGAACCTTTACTTGATAAATTCAAATTATTTCGAAATTTGATTTTTTATATCCCAGGAGCTGTCAACCGATTACCAACCTGGTTCCCGATATTATATTGCTATCTGGCTATTGTGATAGTGGTAAAAAATAAGGACTTACCCCTTGTCTTCAGATTCCATGTAATGATGGGAATGCTATTGGAAATCGCTTTACAGATTGTATGGGTTTCAAGCAATTTCATGCCACTTATACACTTCAAGGGAACATTTGGGATATATTACTGGGCTGGTGTGGCATTGGCGTATATTGTCATAATGATGCAGTGCATAAGGTGTGCTCTTCTTGGTACGTTTGTGAATATCCCAGTTGTTAGTGAATCAGCTTTTCTTCATTCTCTATTTGGTTTAGGAGGATTCCAGCGGCCTTTTTAG 690 0.3971 MLSWLLQGILKGKSVTRLTTVSSPLFIDNQARPSLRVPMSRKMNSKICGQAYIYHWSGFRIPANAEKPEWWWRTLSCIPYLIALQMSATGFYLEPLLDKFKLFRNLIFYIPGAVNRLPTWFPILYCYLAIVIVVKNKDLPLVFRFHVMMGMLLEIALQIVWVSSNFMPLIHFKGTFGIYYWAGVALAYIVIMMQCIRCALLGTFVNIPVVSESAFLHSLFGLGGFQRPF. 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g05549 229 PANTHER PROTEIN TIC 20-II, CHLOROPLASTIC 11 218 IPR005691 -
Seca4g05549 229 Pfam Chloroplast import apparatus Tic20-like 41 214 IPR005691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g05549 Seca-Chr4 104652396 104655600 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g05549 60 228 Chloroplast and Mitochondria Gene Families AT4G03320 57.988 1.65e-77 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g05549 - - aprc:113869676 377.867