Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g05526 ATGAACTTCATCACCAACGAGGACTCTGATAAGTGTCAAAGAGTGAAGAGGAAAACCATTAATAGTGATGATTTGCTATGGGTGATGGCCACTCTTAGTTTCAAGGATTATATTGATCCCCCCCAAGATTTACCTCACCAGATACAGAGAGGTTATTTAAATTTACAGTTTTTTCCCTTACACTTTCACTTCACCAGCTTTTCTGGTCCCCAACAACTATCCTATTCTGAGTTATGA 237 0.3882 MNFITNEDSDKCQRVKRKTINSDDLLWVMATLSFKDYIDPPQDLPHQIQRGYLNLQFFPLHFHFTSFSGPQQLSYSEL. 79
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g05526 78 Gene3D Histone, subunit A 1 51 IPR009072 GO:0046982
Seca4g05526 78 SUPERFAMILY Histone-fold 2 41 IPR009072 GO:0046982
Seca4g05526 78 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 2 40 IPR027113 GO:0001228|GO:0006355|GO:0016602
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g05526 1 40 CCAAT-HAP3 Transcription Factor Family AT3G53340 75.000 2.66e-18 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g05526 K08065 - qsu:112028336 69.707