Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g05490 GGTTTCAACATTTGGGGAAAAAGAAGGCAGCCATGGGAGTGTAACTGCGGCGGCCACAGAGAAGTAACAACCACAGTGACAGAGAGCAGCGGCGGCGCTCGCCGCCTACGAGGAAGGAGACGCAGCGACGGCGGCCACGGGGCGGACAGCGTTACGCGCAGGGGCGGAGAAGGGATGAAGCCGCGGTGGTGCGGCGCCGCGCTCACGGCTGGAAGCGAGAAGGACGCTGGGAGGCTCGGCGGTGCTCGTGACACCGACGGAGGGGCACCGCACGTGGTGGTGCGCGACTGCTTGCGGAAGCGAGCGGTGGCTCGCGGCTGGGCTTGCGCCGGAAGATGGCGCAGGGGCGGAGGCATACCCCGCGGTGGTGGTGTGACAGAAACGGCCGCGAATGTGGCGCGCGGCGGCCGCCGTGGGGGTGTGATTTCCTTTCTCCCTTGCTCTCTCTCTAAATTCCTATTCAACAGTTTGAATCTTGCTCTGGTTTTTTACGGGAATTTGGGTTGTTGGCTTGGATTGAGGAGAAAACAAGTTGTGAAACACAATCAAGCAAAAGAATTTATTTGGAGTCGTAGAGATCGTGCTCAAAACTGGAAGTGGATCACATCGTCCAGCTCGAACCTCTCGTCTCTTGCCTTGACGCCTTCTCGTTCCCTCTTCCATCGTTCACGGGTTTCATGCTATCTTAGAATTGATGACCCAAGTAAAGCTGCTAAGAGTTCTATATGGGCAACACTAGGAATAAAAAATGAATCAGTCAATGGGGGAGGTATGTTTAAGGCCTTCCAATCAACAAAGGAGGAAAAGAACCATGTAGAAGCTTCTCCAGTGTTGAGGGCTAACCCGGCAACTTTGTCTAGATCCCTTAATTTTCATTAG 879 0.5518 GFNIWGKRRQPWECNCGGHREVTTTVTESSGGARRLRGRRRSDGGHGADSVTRRGGEGMKPRWCGAALTAGSEKDAGRLGGARDTDGGAPHVVVRDCLRKRAVARGWACAGRWRRGGGIPRGGGVTETAANVARGGRRGGVISFLPCSLSKFLFNSLNLALVFYGNLGCWLGLRRKQVVKHNQAKEFIWSRRDRAQNWKWITSSSSNLSSLALTPSRSLFHRSRVSCYLRIDDPSKAAKSSIWATLGIKNESVNGGGMFKAFQSTKEEKNHVEASPVLRANPATLSRSLNFH. 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g05490 292 MobiDBLite consensus disorder prediction 25 60 - -
Seca4g05490 292 MobiDBLite consensus disorder prediction 33 56 - -
Seca4g05490 292 PANTHER CYCLIC DOF FACTOR 2 204 292 IPR045174 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g05490 Seca-Chr4 103726691 103729310 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g05490 229 292 C2C2-Dof Transcription Factor Family AT3G47500 64.179 1.32e-17 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g05490 - - gmx:100817354 117.087