Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g05466 ATGGGCGATGGAGGTTTCGCATGCATGCCTTTGCAGTATATTATGGAGAGGTTACCGAATGCCGAGAAGACAATTTGCGGAGGCAAGAGTGGGAATGGCTTCAATTCCAAGTTGCTCAAGTTTGCTGACAGCGAGAGGAAGAAGATGAAGGCCAGGAAAGAGGAGCCAGCGAGGAAGAGTGAATTGGGGTTGGACAGATTGAGCAAGAGAACCAGCAGCGATATTGAGAATGGTGAAATCTGCGCGGACAAGGTTCAGAAGGAAGAAGTGGAAGAGGGTGAATTGGGCACCATGAAGTGGCCCAGAAGTGACCTGGAAAATGGGGAGTTCGTGCCAGAGAATGGTGAGATTGTGAGTGACAAGTGGAAAACAAGGGAACTGGAGAAGGGAGAGATTCATTCTGGGAAATGGAGAAAAGAGGACGTAGAAAGAGGGGAGATAGTTCCTGAGAAGGGTAGGAAAGGAGAAGCTGAGAAAGGAGAATATGGGTCGTGGAGAGGTATGAAGGATGACATCGAGAAGGGAGAATTTATACCAGATAGATGGTATAAGGGAGACATGGGGAAGGACGATTATGGTAACAGTAGAATCCGCAGGTACCATTCAGGAAGGGAGAAAGGGTGGAAAACTGAACGTGAACGCTCACCCCCTTCTGGGAGATATACAGGTGATGATTTTTTTAGAAAGAAAGAATTGAATAGAGGTGGGGGTCAGCATGCTAAAAGTTCACCCAGGTGGGAGAGTGGACAGCAGAGGAATGTAAGGATCAGTTCAAAGATTGTAGATGACCAGAAAAATGTACACAGCAATGGTAAGGACCATACACGAGATTACACTTCTGGTAGTCGTTTAAAGAGGTTTGGCAATGATTCTGACAGCTGTGAGTGGAAGCATTCTGCTGATTTTACTGGTTTAAAAAGTAGAAGGCTTTCTGATGATAGCTATCGTCATGTTCATTCAGAGAACTATTCTCGTCGCTCTGTGGAGCGGTCTTACAGAAATAATAATTCCACAAAAGTATCTACAGAAAAGTACTCTTCTAGGAATCATGAATCTTCTTTGTCTGCAAGACCAGCTTATGACAGGCATGGACGCAGCCCTGATCATTCTGAGCGGTCCCCACGAGACCGAGGTAGGTATTATGATAATAGAGATCGCACTCCATTGCGTCGGTCACCTTGTGGCCGTGACAGATCCCCATATAGCCGGGAGAAATCCCCCCATGGCCGGGAGAGGTCCCCATATATGAGGAACTGGGATAGAAGCCGCCAGCATGATCATAAATTGAGAAGTCCAACATGTGCTGAGCAGTCACCACAAGATCGGGGTTGGCGTCATGTTCGCAGGGACCGCACTCCAAATTTAGTAAAAGGATCCCCCCATGATCGAACTAGGAAAGATAGTCATCAAGAAACGAGTTGTAAAACCTTATCAAGTGAAAAGTATAGCTCCCAAAATACTTGCAAGGATCATGAAGATAAGCCCATTCAAAGGGAGTCAAATTGTTCAGGTACAGAATCTCAAGGTGAAAGAAATGTGCAAAATATGAATGAGCCCATTGAGAAAGACATATGCAGTCAGCCTGTAAAGGAACAGCAGTCCAGCAGCCCAGCTATTAGCAGCAAAGAATCTCCTCGCATGGAACCACCTCCTGAGGAGCTTCCTTCGATGGAAGAAGATATGGACATTTGTGATACCCCTCCACATGTACCTGTGGTGACAGATTTGTCATCAGGGAAATGGTTTTATCTTGATTATGGAGGTATAGAAAATGGACCTGCTAAATTATGTGACATCAGGGTCCTTGTTGATGAAGGGGTACTAATGTCAGATCACTTTATCAAGCACTTAGATAGTGACAGGTGGTTAACAGTTGAAAATGCAGTGTCACCATTGACTGCTCCGAGTTTTCCGTCGGTTGTGTCAGATACCATAACTCAGCTGGTAAATCCTCCAGAAGCTCCTGGTAATCTTTTGGCAGATACTGCAGATATTATTCAATCTGGTCCTGCAAATTATCAGGAAATACCAGCCCCCTCACCGCAGCCACCAGCATGCCCTAATGACAGTGTGCTTACATCTGAACATTTGGACGACCTCCACATTGATGAAAGAGTTCGAAATCTGTTAGAGGGTTATGATGTCATTCCTGGAATGGAACTTGAGGCAATAAAAGAAGCTTTGCAAATGAATTTTGAATATGCAAAAGGAGAGGGATTTGGAGACTATGAAGGTTTTCCTTGGCATGTTTCCTATCTTAAGGAAGATCATGATTCAAGTACTGAGTTAGCATCAAGAGATTCTGAATCTGAGTTAAGTATGTCCTGTGACAAAGATAGTGGATTTGCCTTTGGCATTCCTAGTGACTGGTTTTCCACCCGTTGGTCATGCAAAGGTGGTGACTGGAAGAGGAATGATGATGCCCAAGATAGATATTCTAGGAGGAAACTTGTCCTGAATAATGGTTTTCCATTATGTCAAATGCCAAAGTCTGGATGTGAAGATCCTCGATGGCCTCAAAAAGATGACTTGTATTTTCCTTCTCAAAGCAAGAGGCTTGATCTCCCTCTATGGGCTTTTTGTGCTGATGAGCGGGTTGATTGCAGTGCTGCAAGCAGATCTGTTCAAAGTAAGCTTGCTTCTGTGAGAGGAGTGAAGGGAAATGTTCTTTCAGTGGTAAGGATAAATGCATGCGTGGTCAAGGACCAGGGATCATTGGTCTTTGAGTCTCGCCACAAGACCCGAGGCAAGGATAGACACCATTCAAGGTCAACTCGGCCTTTATCTTCAACCAGTGATAGTAAGAGATCATCAGCTGAAGAAGATTCTCAGTCAAAAGCTCTTAGTGATCATGGTTCTTGCTGGAGCATGGAATTCATCAGCATCCCTAAAGACCACCTCTGTACTGTCCATGAGTTACAATTACATTTGGGTGACTGGTATTACCTTGATGGTTCTGGGCGTGAAAGAGGACCTTCATCATTTTTGGAGCTACAGTGTTTAGTAGATCAAGGAATTATAAAAAAGCATAGCAGTGTGTTCAGGAAAAGTGATAAAATCTGGGTTCCTATTACCTCTGTCACAGAAAATTCTGATGTTGGTCTCACGAGCCACCAAAAAAGCAGTTCAACATCTGGTGCATGCTCTGAACTTACATCAAAGCGAACTCAAGGTGTTTCATATGGTGAACCTTCAAATTCAAGTTTGTTCAACAGCATGCACCCTCAGTTTGTTGGTTACACTCGCGGGAAGCTACATGAATTGGTAATGAAATCATATAAGAGCCGGGAGTTTGCTGCGGCTATAAATGAGGTTTTAGATCCCTGGATCAATGCAAGACAACCAAAGAAAGAAATCGAGAAACAAATATATTGGAAATCAGAAGGTGATGTACGTGCTGCCAAAAGAGCCCGGACTCTGGTTGATGATAGTGAAGAAGACAGTGATTGGGAAGATGGTGATGTTACTATTGAGAAGGATGAATCCACTTTTGAGGATCTATGTGGTGATGCTACTTTCCCTGAAGAAGAAATTGGTATTACTGAATCTGATGTGGGAAGCTGGGGCTTATTGGATGGTCAGATTTTGGCACGAATCTTCCATTTTTTGAGATCTGATTTCAAGTCCCTTGTCTTTGCATCACTGACTTGCAAGCATTGGAGAGCTGCTGCAAGGTTTTATAAAGAAGTTTCAATACAGGTCAATTTGTCATCCTTAGGTCATTCCTGCACTGATACCATGCTGTGGAACATTATGAATGCTTATGAGAAAGACAAGATCAATTCTATAATTCTCATGGGTTGTGTCAATATTACAGCTCACATGCTTGAGAAAATTCTTCTTTCATTTCCTGGTTTATGTACAATAGACATTAGAGGATGCAGTCAGTTTGGAGAGCTAACTTCTAAATTTGACAATTTGAAATGGATCAAGAGCCGAAGTTCACGCATGACTAGAATTGCTGAGGAGCCTCATAAAATAAGAAGCCTTAAACATATAACAGAGCAAGGTTCATCTGTTTCCAAGTCTAGCAATTTAGGCATAGATGATTTTGGACAATTGAAGGATTATTTTGAAAGTGTGGATAAGAGAGACACGGCGAAGCAGTTATTCCGCCAAAACTTATACAAGCGGTCCAAATTATATGATGCTAGAAGGTCCTCTTCCATTCTATCTAGGGATGCTCGCACAAGACGTTGGGCAATTAAAAAATCTGAAAGTGGTTATAAGAGGATGGAGGAATTCCTTGCTTCAAGACTAAAGGAAATTATGAAGACGAACTCCTGTGACTTTTTTGTACCAAAGGTTGCAGAAATTGAGGCTAAAATGAAAAGTGGTTATTACAGTAGCCGAGGGTTGAGCTCTGTCAAAGAGGACATAAGTAGAATGTGCCGTGATGCAATAAAAGCAAAGAATCGGGGTGATGTTAGTGACATGAATCATGTTATCACATTATTTATTCAGCTTGCAACACGGCTGGAAGAGAGTTCCAAGTCATGGGACAATGGCTTGCCAGCAGTGATCTGCTCTACATCCTCAAAGTATAAAAAGAATAGATTAGTGAATGAAAGGAAGTATAGGAGTAATGGAACACATGGTGGTTTGGATAAGAAATTTATGGACTCAGAAAGTGAAACGTCTGATGACTTTGATAGGTCTTACGAAGATGGCAAGAGTGTCAGTGATACTACAACCACTGACACTGAAAGTGACCAAGAAGGTCTACTTAGGGAGTCAAGAGGGGACGGATACTTCACACCTGAGGAAGGGTTGGATTTCATAACTGATGATCGTGAATGGGGTGCTCGCATGACAAAAGCAAGCCTGGTTCCTCCAGTTACAAGGAAATATGATATCATTGATCAATATGTCATTGTAGCTGATGAGGAGGATGTGCGAAGGAAGATGCGGGTTTCATTACCAGATGACTATGCTGAGAAGCTGAGTGCACAAAAGAATGGCACTGAGGAGTCAGATATGGAACTTCCTGAAGTAAAAGACTTCAAACCTAGAAAGCAGCTCGGAAATGAGGTTATTGAGCAAGAAGTTTATGGAATTGATCCTTATACCCATAATCTTTTGCTTGATTCTATGCCAGAGGAGTTAGATTGGTCTCTGCAGGAGAAGCATTTGTTTATAGAAGACATGCTCCTTCGAACATTGAATAAGCAAGTTAGAAATTTTACTGGAACTGGAAGCACTCCAATGAGCTACCCTTTGCAGCCTATTATTGAAGATATTAAAAGATGTGCTGAGGAGGACTGTGATGCAAGAACAATTAGAATGTGTCAAGGTATCCTAAAGGCCATGGACAGTCGTCCAGATGACAAATATGTAGCTTATAGAAAGGGTCTTGGTGTTGTCTGCAACAAGGAAGAAGGCTTTGCCCATGATGATTTTGTTGTGGAGTTTCTGGGAGAGGTTTATCCTGTGTGGAAGTGGTTCGAGAAACAAGATGGGATTCGATCTCTGCAGAAAGATAGTAAAGATCCAGCACCAGAATTCTATAACATCTACCTTGAGAGGCCAAAGGGTGATGCTGATGGGTATGACTTAGTTGTTGTTGATGCAATGCACAAGGCTAATTATGCCAGTCGAATATGTCATTCTTGCCGACCTAACTGTGAAGCCAAAGTTACTGCTGTTGATGGTCATTACCAAATTGGTATTTATAGTGTTCGTAAAATTCAATATGGTGAGGAGATCACTTTTGATTACAATTCTGTGACAGAGAGCAAGGAGGAGTATGAAGCATCAGTTTGTTTGTGTGGAAGTCAAGTATGCCGGGGGAGCTATCTGAATCTGACTGGTGAAGGGGCTTTCCAAAAGGTTCTGAAGGATTCACATGGAATTCTTGATCGTCATTATTTGATGCTAGAAGCTTGTGAACTAAACTCCGTGTCTGAAGAGGACTATAATGACCTGGGAAGAGCTGGTTTAGGCAGTTGCTTGCTTGGAGGCCTTCCAGATTGGCTTGTTGCTTATGCTGCTCGCCTTGTGAGATTCATAAATTTTGAAAGAACTCAACTTCCTGAGGAAATTCTAAAGCATAATCTGGAAGAAAAAAGAAAATATTTTTCAGATATTTGTCTTGAAGTTGAAAGGAGTGATGCCGAAGTTCAGGCTGAGGGCGTGTACAACCAAAGGCTTCAGAATCTTGCTGTCACTCTTGATAAGGTAAGGTATGTTATGAGATGTATTTTTGGTGATCCACGGAACGCACCACCTCCTCTTGAGAAGCTCAGTCCTGAAACAATTGTTTCCTTCCTCTGGAAAGGGGAGGGTTCATTTGTTGAGGAGCTTCTTCAGTGCATAGCTCCTCATGTGGAAGAAGACATCTTGAATGATCTCAAGTCCAAAATTCATGCTCATGATCCTTCAAGTGCCACAGATATTCGAAAAGAGCTTCGGAGATCCCTTTTATGGTTGAGGGATGAGGTCCGAAATCTTTCTTGTACATATAAATGTCGGCATGATGCTGCTGCTGACTTAATCCATATTTACGCATATACCAAGTACTTCTTTAGAATACGAGATTATCAAACCGTAAAATCACCACCTGTCTATATTAGTCCACTTGACTTAGGTCCCAAGTACACTAACAAGTTGGGAGCAGAATTTCAGGAGTATCAAAAGATATATGGTGAAAATTATTGTCTAGGGCAGCTGATTTTTTGGCATAATCAGAGTAATGCAGACCCAGATCGTAGCTTGGCAAGAGCCAGCAGGGGTTGTTTGTCTTTACCAGACATCAGTTCCTTTTATGCCAAGGCTCAAAAACCATCACGGCAACGGGTTTATGGTCCAAGGACTGTCAGATCTATGCTGGCAAGAATGGAGAAGCAGCCTCAGAGATCTTGGCCCAAAGACCGGATATGGTCATTCAAAAGTTCTCCGAAATTCTTTGGTAGCCCAATGTTAGATGCTGTAATAAATAACTCTCCACTGGACAGGGAGATGGTTCATTGGTTGAAGCACAGACCTGCCATATTCCAGGCCATGTGGGACCGTTAA 7014 0.4263 MGDGGFACMPLQYIMERLPNAEKTICGGKSGNGFNSKLLKFADSERKKMKARKEEPARKSELGLDRLSKRTSSDIENGEICADKVQKEEVEEGELGTMKWPRSDLENGEFVPENGEIVSDKWKTRELEKGEIHSGKWRKEDVERGEIVPEKGRKGEAEKGEYGSWRGMKDDIEKGEFIPDRWYKGDMGKDDYGNSRIRRYHSGREKGWKTERERSPPSGRYTGDDFFRKKELNRGGGQHAKSSPRWESGQQRNVRISSKIVDDQKNVHSNGKDHTRDYTSGSRLKRFGNDSDSCEWKHSADFTGLKSRRLSDDSYRHVHSENYSRRSVERSYRNNNSTKVSTEKYSSRNHESSLSARPAYDRHGRSPDHSERSPRDRGRYYDNRDRTPLRRSPCGRDRSPYSREKSPHGRERSPYMRNWDRSRQHDHKLRSPTCAEQSPQDRGWRHVRRDRTPNLVKGSPHDRTRKDSHQETSCKTLSSEKYSSQNTCKDHEDKPIQRESNCSGTESQGERNVQNMNEPIEKDICSQPVKEQQSSSPAISSKESPRMEPPPEELPSMEEDMDICDTPPHVPVVTDLSSGKWFYLDYGGIENGPAKLCDIRVLVDEGVLMSDHFIKHLDSDRWLTVENAVSPLTAPSFPSVVSDTITQLVNPPEAPGNLLADTADIIQSGPANYQEIPAPSPQPPACPNDSVLTSEHLDDLHIDERVRNLLEGYDVIPGMELEAIKEALQMNFEYAKGEGFGDYEGFPWHVSYLKEDHDSSTELASRDSESELSMSCDKDSGFAFGIPSDWFSTRWSCKGGDWKRNDDAQDRYSRRKLVLNNGFPLCQMPKSGCEDPRWPQKDDLYFPSQSKRLDLPLWAFCADERVDCSAASRSVQSKLASVRGVKGNVLSVVRINACVVKDQGSLVFESRHKTRGKDRHHSRSTRPLSSTSDSKRSSAEEDSQSKALSDHGSCWSMEFISIPKDHLCTVHELQLHLGDWYYLDGSGRERGPSSFLELQCLVDQGIIKKHSSVFRKSDKIWVPITSVTENSDVGLTSHQKSSSTSGACSELTSKRTQGVSYGEPSNSSLFNSMHPQFVGYTRGKLHELVMKSYKSREFAAAINEVLDPWINARQPKKEIEKQIYWKSEGDVRAAKRARTLVDDSEEDSDWEDGDVTIEKDESTFEDLCGDATFPEEEIGITESDVGSWGLLDGQILARIFHFLRSDFKSLVFASLTCKHWRAAARFYKEVSIQVNLSSLGHSCTDTMLWNIMNAYEKDKINSIILMGCVNITAHMLEKILLSFPGLCTIDIRGCSQFGELTSKFDNLKWIKSRSSRMTRIAEEPHKIRSLKHITEQGSSVSKSSNLGIDDFGQLKDYFESVDKRDTAKQLFRQNLYKRSKLYDARRSSSILSRDARTRRWAIKKSESGYKRMEEFLASRLKEIMKTNSCDFFVPKVAEIEAKMKSGYYSSRGLSSVKEDISRMCRDAIKAKNRGDVSDMNHVITLFIQLATRLEESSKSWDNGLPAVICSTSSKYKKNRLVNERKYRSNGTHGGLDKKFMDSESETSDDFDRSYEDGKSVSDTTTTDTESDQEGLLRESRGDGYFTPEEGLDFITDDREWGARMTKASLVPPVTRKYDIIDQYVIVADEEDVRRKMRVSLPDDYAEKLSAQKNGTEESDMELPEVKDFKPRKQLGNEVIEQEVYGIDPYTHNLLLDSMPEELDWSLQEKHLFIEDMLLRTLNKQVRNFTGTGSTPMSYPLQPIIEDIKRCAEEDCDARTIRMCQGILKAMDSRPDDKYVAYRKGLGVVCNKEEGFAHDDFVVEFLGEVYPVWKWFEKQDGIRSLQKDSKDPAPEFYNIYLERPKGDADGYDLVVVDAMHKANYASRICHSCRPNCEAKVTAVDGHYQIGIYSVRKIQYGEEITFDYNSVTESKEEYEASVCLCGSQVCRGSYLNLTGEGAFQKVLKDSHGILDRHYLMLEACELNSVSEEDYNDLGRAGLGSCLLGGLPDWLVAYAARLVRFINFERTQLPEEILKHNLEEKRKYFSDICLEVERSDAEVQAEGVYNQRLQNLAVTLDKVRYVMRCIFGDPRNAPPPLEKLSPETIVSFLWKGEGSFVEELLQCIAPHVEEDILNDLKSKIHAHDPSSATDIRKELRRSLLWLRDEVRNLSCTYKCRHDAAADLIHIYAYTKYFFRIRDYQTVKSPPVYISPLDLGPKYTNKLGAEFQEYQKIYGENYCLGQLIFWHNQSNADPDRSLARASRGCLSLPDISSFYAKAQKPSRQRVYGPRTVRSMLARMEKQPQRSWPKDRIWSFKSSPKFFGSPMLDAVINNSPLDREMVHWLKHRPAIFQAMWDR. 2338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g05466 2337 MobiDBLite consensus disorder prediction 1033 1063 - -
Seca4g05466 2337 MobiDBLite consensus disorder prediction 355 432 - -
Seca4g05466 2337 SUPERFAMILY F-box domain 1182 1225 IPR036047 GO:0005515
Seca4g05466 2337 MobiDBLite consensus disorder prediction 910 945 - -
Seca4g05466 2337 MobiDBLite consensus disorder prediction 500 542 - -
Seca4g05466 2337 CDD SET_SETD2-like 1781 1929 - -
Seca4g05466 2337 Pfam Protein SET DOMAIN GROUP 2 C-terminal 1918 2337 IPR045606 -
Seca4g05466 2337 MobiDBLite consensus disorder prediction 1526 1558 - -
Seca4g05466 2337 CDD F-box_SF 1195 1225 - -
Seca4g05466 2337 MobiDBLite consensus disorder prediction 243 257 - -
Seca4g05466 2337 MobiDBLite consensus disorder prediction 45 99 - -
Seca4g05466 2337 MobiDBLite consensus disorder prediction 1526 1588 - -
Seca4g05466 2337 MobiDBLite consensus disorder prediction 441 474 - -
Seca4g05466 2337 SMART set_7 1773 1913 IPR001214 GO:0005515
Seca4g05466 2337 Pfam SET domain 1848 1907 IPR001214 GO:0005515
Seca4g05466 2337 MobiDBLite consensus disorder prediction 258 328 - -
Seca4g05466 2337 MobiDBLite consensus disorder prediction 329 354 - -
Seca4g05466 2337 SUPERFAMILY SET domain 1782 1930 IPR046341 -
Seca4g05466 2337 MobiDBLite consensus disorder prediction 45 117 - -
Seca4g05466 2337 ProSiteProfiles SET domain profile. 1764 1907 IPR001214 GO:0005515
Seca4g05466 2337 MobiDBLite consensus disorder prediction 1571 1588 - -
Seca4g05466 2337 Gene3D SET domain 1740 1938 IPR046341 -
Seca4g05466 2337 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ATXR3 142 2337 - -
Seca4g05466 2337 MobiDBLite consensus disorder prediction 485 499 - -
Seca4g05466 2337 MobiDBLite consensus disorder prediction 138 166 - -
Seca4g05466 2337 MobiDBLite consensus disorder prediction 183 556 - -
Seca4g05466 2337 MobiDBLite consensus disorder prediction 183 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g05466 Seca-Chr4 102883295 102897800 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Seca4g05466 SET 5.7e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g05466 K22748 - gmx:100776205 3953.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g05466 4 102883295 102897800 Seca4g05466 4 102883295 102897800 ECH