Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g05450 ATGGCTTCCTCAAAGCTCTTTACAAATGTTTGCTTCTCCCTGAGCTTAGTTCTTCTTCTCCAAACATCTTTTGCAGCCAACCCTCTCTTCCATATTTGTTCAAGCTCTGAGAACTTCACATCCTACAGCCCTTATGAATCAAACTTGAAAACACTCATCAATTCACTTATCTACAAGACTCCTTCAACAGGTTTTGGTATGGGCTCAGTGGGCCAATACCAAAACCAACAAGCATATGGGCTTGCACTTTGTCGTGGTGATGTGTCACCCTCAGAATGCAAAACTTGTGTCTCTGAGGCAACGAAAGAAATTCTCAATAGCTGCCCATACAACAAAGGTGCCATAATATGGTATGATAACTGCTTGTTCAAGTACTTGGATAAAGATTTCTTTGGCAAAATTGACAGCACAAACAAATTCTCTTTGTTGAATGTGCAAAACGTTAGTGATCCTACCACATTCAATTACATTACCAAGGAATTGTTGAGCACACTTGCCTATAAAGCTTCTATGGACCCAAAATTGTATGCAACGGGAGAGCTAAAGATTGGAGGATTAGATAGAGTTTATGGATTAACCCAGTGCACTAGAGACCTTTCTGGCGTTGATTGCAAGAAGTGTCTTGATGATGCAATTAGTGAACTTCCAAATTGTTGTGATGGGAAAAAAGGAGGCAGGGTTGTTGGTGGAAGTTGCAACATCCAATATGAGATTTACCCATTTGTTAAGAGAGTAAATTAA 741 0.3981 MASSKLFTNVCFSLSLVLLLQTSFAANPLFHICSSSENFTSYSPYESNLKTLINSLIYKTPSTGFGMGSVGQYQNQQAYGLALCRGDVSPSECKTCVSEATKEILNSCPYNKGAIIWYDNCLFKYLDKDFFGKIDSTNKFSLLNVQNVSDPTTFNYITKELLSTLAYKASMDPKLYATGELKIGGLDRVYGLTQCTRDLSGVDCKKCLDDAISELPNCCDGKKGGRVVGGSCNIQYEIYPFVKRVN. 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g05450 246 Gene3D - 26 130 IPR038408 -
Seca4g05450 246 Gene3D - 135 241 IPR038408 -
Seca4g05450 246 FunFam Cysteine-rich receptor-like protein kinase 25 138 241 - -
Seca4g05450 246 Pfam Salt stress response/antifungal 33 126 IPR002902 -
Seca4g05450 246 Pfam Salt stress response/antifungal 146 238 IPR002902 -
Seca4g05450 246 PANTHER CYSTEINE-RICH REPEAT SECRETORY PROTEIN 38-RELATED 10 243 - -
Seca4g05450 246 ProSiteProfiles Gnk2-homologous domain profile. 27 130 IPR002902 -
Seca4g05450 246 ProSiteProfiles Gnk2-homologous domain profile. 136 241 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g05450 Seca-Chr4 102760840 102761580 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g05450 29 243 Pollen Coat Proteome AT4G20670 42.411 2.10e-50 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g05450 - - gmx:100527155 397.512
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g05450 4 102760840 102761580 Seca4g05450 4 102760840 102761580 ECH