Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g05448 ATGGCTTCCTCAAAGCACTTTACAATTGTTCTCTTCTCACTAAGTGTAGTTCTCCTTCTCCAAACATCTTTTGGAGCCGACCCTCTCTTCCATATATGTTCAACCTCTGAGAACTTCACATCTCATAGCCCTTATGAATCAAATTTGAAAGTGCTCATCAACTCGCTTATCTACAAGACTCCTTCAACGGGTTTCGGTATGGGCTCAGTGGGCCAATACCCAAACCAACAAGCATATGGGCTTGCTCTTTGTCGTGGTGATGTGTCACCCTCAGAGTGCAAAACTTGTGTCTATGAGGCAACAAAAGAAATCCGCAATAGCTGCCCATACAACAAAGGTGCCATCATATGGTATGATAACTGCTTGTTCAAGTACTTAGATACAGATTTCTTTGGCAAAATTGACAACACAAACAAGTTCTCTTTGTTGAATGTGCAAAATGTGAGCGATCCTGCCACATTCAACTACATTACCAAGGAATTATTGAGCTTACTTGCCTACAAAGCTTCTATGGACACAAAAATGTATGCAACTGGAGAGATGAAGATTGGAGGATCAGAGAAAGTTTATGGGTTAACTCAATGCACCAGAGACCTTTCCAGCGCTGATTGTAAGAAGTGTCTGGATGATGCAATTAGTGAACTTCCAAATTGTTGTGATGGAAAAAAAGGGGGCAGGGTTGTTGGTGGAAGTTGCAATATCCAATATGAAATTTACCCATTTGTTAGAGAATAA 735 0.4082 MASSKHFTIVLFSLSVVLLLQTSFGADPLFHICSTSENFTSHSPYESNLKVLINSLIYKTPSTGFGMGSVGQYPNQQAYGLALCRGDVSPSECKTCVYEATKEIRNSCPYNKGAIIWYDNCLFKYLDTDFFGKIDNTNKFSLLNVQNVSDPATFNYITKELLSLLAYKASMDTKMYATGEMKIGGSEKVYGLTQCTRDLSSADCKKCLDDAISELPNCCDGKKGGRVVGGSCNIQYEIYPFVRE. 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g05448 244 ProSiteProfiles Gnk2-homologous domain profile. 136 241 IPR002902 -
Seca4g05448 244 PANTHER CYSTEINE-RICH REPEAT SECRETORY PROTEIN 38-RELATED 5 243 - -
Seca4g05448 244 Pfam Salt stress response/antifungal 147 238 IPR002902 -
Seca4g05448 244 Pfam Salt stress response/antifungal 33 125 IPR002902 -
Seca4g05448 244 Gene3D - 26 130 IPR038408 -
Seca4g05448 244 Gene3D - 136 241 IPR038408 -
Seca4g05448 244 ProSiteProfiles Gnk2-homologous domain profile. 27 130 IPR002902 -
Seca4g05448 244 FunFam Cysteine-rich receptor-like protein kinase 10 138 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g05448 Seca-Chr4 102738869 102739603 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g05448 10 243 Pollen Coat Proteome AT4G20670 41.129 1.20e-54 175
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g05448 - - gmx:100527155 394.815
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g05448 4 102738869 102739603 Seca4g05448 4 102738869 102739603 ECH