Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g05382 ATGCTAATCAATGATGAAGAGGACGATGGAACCACAAGGAAAAAGCTTAGGCTCACAAAAAATCAGTCAATTATTCTTGAAGAGAGCTTCAAAGAGCACAACACTCTTAACCCCGATTATAAAATAAAAATTGTGAAACTGAAATTTCAGGACGAGAAGCAAACAGAGGTGGACTGTGAGTTCTTGAAAAGGAGCTGTGAGAATCTGACGGAGAAAAACAGGAGGTTGCAGAAGAAAGTCCAGGAGCTTAAAGCACTGAAACTTTCCCCACAATTCAAAGGTATTTAA 288 0.3889 MLINDEEDDGTTRKKLRLTKNQSIILEESFKEHNTLNPDYKIKIVKLKFQDEKQTEVDCEFLKRSCENLTEKNRRLQKKVQELKALKLSPQFKGI. 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g05382 95 Pfam Homeobox associated leucine zipper 53 87 IPR003106 GO:0006355|GO:0043565
Seca4g05382 95 Coils Coil 52 89 - -
Seca4g05382 95 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 53 92 - -
Seca4g05382 95 SMART halz 53 95 IPR003106 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g05382 Seca-Chr4 101237506 101238241 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g05382 3 92 Homeobox Transcription Factor Family AT4G16780 57.547 1.87e-33 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g05382 K09338 - gmx:547858 129.028