Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g05355 ATGCAAGTTGAATCGGTTCCCCATTCTGTTGCGTGTGCTTTCTCTCTCTCTCTCTCCTTAGAACCGAAGGTAACAGGAAATAGCAGATTCGTTTTTCATAAAAAAGGCAGTTTCCATTTACCATACAAGTACAAAGGGGAATGGAATTTGACGGTGTTATCTTCTCATTCAACTCCGTTATTGTTAACCGACACTTCCATCGCCATGATGGATCCCTTGATCCACAAGCTCCGGCGCCGCCTCCTCGCATGGCTTCACCGATCTCGTTCCCGTTCGGTATTATTTGTGAGGAGACTTTCGTATGAGGATGTTAGAAAGGCAACCGATGGTTTCCACAGAGTCGTTTATAGCAATTCGGAAGTTTGTGCATATGTTGCGAATTTCCGAGAGGGTGGTGGTGTTTGCTTGGTGAAAGAAGTGAAAGACTTTGGTCAAGACAACGACAATTTCCACAGACAAGTGCAATTCTTGGGGCGCTTGCATCATCGCCACCTTCTCTCACTTAAAGGCTTTTCTATGGGACACAATCGCAAGAGACTGCTCATATTTGACAACATAGAAAATGGAAGCTTAAAGGAGCATCTTAATGACCCGTTGAAGACTCCCTTAAATTGGAGGACGAGGTTACAGATAGCTAATGGTGTTGTGGCTGCACTGGTAAGCTCAACAAATTTAAGCGTGTCCAAAACTAATGATGCCTAA 702 0.443 MQVESVPHSVACAFSLSLSLEPKVTGNSRFVFHKKGSFHLPYKYKGEWNLTVLSSHSTPLLLTDTSIAMMDPLIHKLRRRLLAWLHRSRSRSVLFVRRLSYEDVRKATDGFHRVVYSNSEVCAYVANFREGGGVCLVKEVKDFGQDNDNFHRQVQFLGRLHHRHLLSLKGFSMGHNRKRLLIFDNIENGSLKEHLNDPLKTPLNWRTRLQIANGVVAALVSSTNLSVSKTNDA. 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g05355 233 Pfam Protein tyrosine and serine/threonine kinase 135 216 IPR001245 GO:0004672|GO:0006468
Seca4g05355 233 Gene3D Transferase(Phosphotransferase) domain 1 88 221 - -
Seca4g05355 233 PANTHER OS01G0253100 PROTEIN 92 219 - -
Seca4g05355 233 FunFam Protein kinase superfamily protein 85 184 - -
Seca4g05355 233 SUPERFAMILY Protein kinase-like (PK-like) 101 220 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g05355 Seca-Chr4 100458463 100460056 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g05355 97 219 Receptor kinase-like Gene Family AT3G19300 42.276 2.97e-25 101
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-1 Seca4g05355 PK_Tyr_Ser-Thr 9.4e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g05355 - - aprc:113853565 233.417