Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g05340 ATGTCAACTTGTATGAGCAAAAAGATCCAAGGCTTAAGCCTATCTAAGTCTCTGAGAATAGACGAAGAGACTATGTTCATGCAGAAGCAGGGCATTGTCACCATTTTGGGCTCTGACTTCGATAGAAACAGAGCTTCTGCTGCCACTTCTCTGCGAAGGACTCTATCTGCAGACATGTCCTCCAAAAAATGGCTCTCTCAAGCCATGAAAAAAACTGCTTCCTCTGAAGAACTCTCACACTCAAACTCAAATGTCACTGCTGATCACTCATTCTCCTCATCTGATGGAGAAGATGACTATGAAGAAAGAGAACGAGTCCAAATTTGGAGCTCAATTCAACTAGACAAGAAAACAGAACACTGTGATATATGGAGTTCAATCTTGTCCAATAAGGCCAATGATGAAGCCTCTAAATCAACTACTCCTTATGTTCATCCACTTGTGAGAAGGTCAAAAAGCTGTTTGAATCAAAAGAGTCTTGAAATATGCACTGAGAGTCTTGGATCCGAGACTGGCTCAGATGGGTTCTCTTCTTACCCACCATCTGAAACAGGGGAAACAGAGGAGGAAAAGGAAAAGGACAAAGAAGAAGAGAAAGTGATAGTGCAACCATACGATGATGAAGAGGAGAAGTTTCAAGTTCCAAAATACAACTATGCTGTGAAGAAGTCCTTGCCTCGTTCTTTCCCTCCTCCACTTCCTTCACTCCAAATGAGGTCCCACCGTGACAATGGAAGGTTGTTTCTACAAGCTGTCTCTGTTCCTTCACAGAACAATTTTTCTGCTCAACGCCAAGAAGGTCGCTTGGTTCTCACGTTTGCTGCTCATCATAATGAAGATGAAGACCCTATGACTGAAGAGGAAGAAGAAGAAGAGAAAGATCATGTGGAGGTGGAGGAGTTGGATGAAGATGATGATGAAGCAGGGGAGGAGGAGGTTGAGACTGTGACAGAGGAAGCAGAGAAATTTTCTAGTGGGGTTACAAGTGTTCATGGGTTAGCATTAATGATGAATAAGCCAATTGGGTTAGTTAACAAGAGTCCAAAATGGTCAGAGAAGTTCAATGAAGTGGCCAATTTTGTTCCCTCAACACCAGGTTCTTTCAATGCTTATGAATACTACTGGAGGACCAAGCCAACAGCAAAAGCTGCTCTTGTTACTAACCCATTTACCCTTCCACAAAATAAGTACTCATTTTTTAAGCAAACTTCAAATGAAGGACAAGAGTTGCTGGTTCTGAGAGGGAAGAATGGGGATTACTTGGTTCACAATTTGAAGAGTTGCAAGGATTCTAGGAGGTCTTTTCTGTTCTGGGAGCCTTATTGCATTGCTACCTGA 1338 0.4238 MSTCMSKKIQGLSLSKSLRIDEETMFMQKQGIVTILGSDFDRNRASAATSLRRTLSADMSSKKWLSQAMKKTASSEELSHSNSNVTADHSFSSSDGEDDYEERERVQIWSSIQLDKKTEHCDIWSSILSNKANDEASKSTTPYVHPLVRRSKSCLNQKSLEICTESLGSETGSDGFSSYPPSETGETEEEKEKDKEEEKVIVQPYDDEEEKFQVPKYNYAVKKSLPRSFPPPLPSLQMRSHRDNGRLFLQAVSVPSQNNFSAQRQEGRLVLTFAAHHNEDEDPMTEEEEEEEKDHVEVEELDEDDDEAGEEEVETVTEEAEKFSSGVTSVHGLALMMNKPIGLVNKSPKWSEKFNEVANFVPSTPGSFNAYEYYWRTKPTAKAALVTNPFTLPQNKYSFFKQTSNEGQELLVLRGKNGDYLVHNLKSCKDSRRSFLFWEPYCIAT. 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g05340 445 MobiDBLite consensus disorder prediction 166 207 - -
Seca4g05340 445 MobiDBLite consensus disorder prediction 279 324 - -
Seca4g05340 445 MobiDBLite consensus disorder prediction 71 91 - -
Seca4g05340 445 MobiDBLite consensus disorder prediction 282 317 - -
Seca4g05340 445 MobiDBLite consensus disorder prediction 166 183 - -
Seca4g05340 445 MobiDBLite consensus disorder prediction 71 104 - -
Seca4g05340 445 Pfam Fantastic Four meristem regulator 228 273 IPR046431 -
Seca4g05340 445 PANTHER FANTASTIC FOUR-LIKE PROTEIN (DUF3049) 47 445 IPR021410 -
Seca4g05340 445 MobiDBLite consensus disorder prediction 184 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g05340 Seca-Chr4 100252766 100255056 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g05340 - - aprc:113855465 446.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g04535 4 83475764 83477323 Seca4g05340 4 100252766 100255056 PCT