Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g05323 ATGGGATTTTTGTTGAAAGAAACTTTGAAGACTCTGTGCGGTCGGAATCAATGGTCTTATGCCGTGTTCTGGAAGATCGGTTGCAACAATTCAAAGCTATTAATCTGGGAAGAATGCTATTATGATCCCTTGTCATGTCCTTTCCCTCCACACTCTTTTGGGATGTCTAATTTGCCTAATCAGAATGGGGAAGGATGCTGGTTTTCCTCAGAGTCTCAAGTAGGGATTCAAGAGGACAGAATCTCTTCTTTGATTAACAAAATGATAGTAAATAATTCAGTCATTGTTGCAGGTGAAGGTATAATTGGACGGGCTGCGTTTACAGGAAGCCATCAGTGGATTCTTTTGAATAATTTCACTAAAGATGCATATCCCCCTGAGGTTTATGCTGAAGTGCATCACCAATTTTCAGCTGGAATGCAGACAGTAACAGTTATTCCTGTGCTCCCTCATGGGGTTGTTCAACTTGGTTCTTTCTTCCCAATAATGGAGAATATTGGATTTGTGAATGATGTGAAGAGCTTGATCTTGCAATTGGGATGTATTCCTGGTGCCCTACTATCCGAAGACTACTCAGCAAAACTTTCAAATGAAAGACTTGCTGGACCTGCTACTGCTGGTGTGCCTGTGTATCTTAATCCACCAGTCATTACCTCAAATTCTACTCCCTCAGTAGCTAATGGCTCCAATCAGCAATGTAATTCCTCTCATGCTTCAAGGCCTACTGTTCAGACACCTTGTCCTCTGAGGGGAGAAATAAATACTTGCCAGGGTTCTGAATTGACTCCCCAGACCCATAACCTGAACCAGATATCCAATAACATTTGTCAAGCAAAGTTAATTTCAATGAGTAAAACAGGTTTTCCTGGCCAACGGGAGAATAGAGCTGTGGAGGCTGAAGTGATACCCTCAAATTTTGGTTCATGCCTGCAACAGCAATCTGTTTCATATAATGCAAGATCTACATTCAATCACTTATCTGGTTCTGGGCCTCTTGGTCAATCAGGCCTTAGTGACCATAGTCTAAAATATATGGAACAACAAATTATGTCAGCCATTGGGAATCGAGATCATGTTAATCCTTGTATTAATGCATCAAGTACGGTAAACATGTCTCAACCAAAAACAGATGGAGGCCATATACTGAGCCATAATCTAAGTTCTGGCAGTACTTCATTACTTAGAGGAATCCCAGTACATGGTGGGATGAGTAGTCTTTTGAGAAAAAATCTGATTACTAGTTCAAAATCTCCCAAACTATATGCGGGTGATTTATCTTGTAAACAAGAAGTTGGGATTGGACTTCAAAATGATGATTCAACTAAAGCTGGGGGTTATTCTCTGGCAAATTTGACTAGTCAATCAGGTACCTTTCCCATGCCTCTAGAAGGTTCTGATCAGAAGATTCTCCCTGTAGATATAAAGTCTGCTTCAACTGATCAAAAGATACACTATGATTTGCTTCAGGCTCCTAACATCCCATCTTTTCATGTTGAGGAGCATGTGCCTTATAGTGGTCAAATCCCTGGTTTTGTCCATGATTGCCTTGATAAAGATGGTACCAGTCAATCTATAATGACAATGAATCCTAAACATGAACAAGCTTGTGCTCAACCTCCATCAGGGGACGACCTGTTTGATGTTTTAGGTGTGGATTTTAAAAACAAGCTGCTGAATGGAAAATGGAATAAACTGCTTCCTGATGAACCAGATGCTAATGCAGAAAATATGGTTAAAAAGGAAACATGTATGAATATGCAGGGTACAAATTCTGATTGTTATTCAGTTCATGAAACAATATCAGACAGTGGCATCTTTTCTGGGATGGGAACAGACCACCTCTTGGATGCTGTGGTCTCAAAGGCCAAACCTGTTGTGAAGCAGAATTCTGATGACATGTCTTGCAGGACAACATTGACAGTGAATAGTACTTCCTCTGTTCCCTCTCCTGCCTGCAAACAGGTTATGTCTGGTCAGATCCCAGGGGGATTGTTTGATTTCCCTAAGAATGGTGGTAAAATAGGTGCTGTAGAAACTAGTTCTCTAAGGTCTGGATGTAGCAAGGATGATGCTGGAAATTGTTCTCAAACTACTTCTATATATGGGTCTCAACTTAGTTCATGGGTTGAGAATGGTGGCAATGTGAAGTGTGAAAATAGTGTTTCAACTGGATACTCTAAGCGCTCAAATGATGGTTGCAAACCAAATCGAAAAAGACTCAAACCAGGAGAGAATCCCAGGCCTCGACCTAAAGATCGCCAAATGATTCAAGATCGTGTAAAAGAGTTACGAGAAATTGTACCAAATGGAGCAAAATGTAGCATAGATGCACTGCTGGAACGGACCATTAAGCATATGCTTTTCTTGCAAAGTGTGACAAAGCATGCTGACAAGCTGAAACAGACAGGGGAGTCTAAGATGATTAGTAAGGAAGGTGGGCTGCTTTTGAAAGACAACTTTGAGGGAGGCGCTACCTGGGCATACGAGGTTGACTCCCAATCATTGGTCTGCCCTATTATAGTTGAAGATCTAAATGCTCCTCGTCAGATGCTAGTGGAGATGCTTTGCGAGGATCGAGGTTTCTTTTTGGAAATAGCTGACCTAATCAGAGGACTAGGTTTAACCATCCTCAAGGGTGTAATGGAAGCCCACAATGACAAAATCTGGGCACGCTTTGCAGTTGAGGCAAATAGGGATGTAACAAGGATGGAAATATTCATGTCACTTGTTCGTCTTTTGGAGCAAATGGTGAAGGGTGATGCATCTTCATCCAATGCAATTGATAACATGATGGTTTATCACTCTTTCCCACAAGCTACCCAAATACCAGCAACTGGAAGTTTGCAATGA 2850 0.4133 MGFLLKETLKTLCGRNQWSYAVFWKIGCNNSKLLIWEECYYDPLSCPFPPHSFGMSNLPNQNGEGCWFSSESQVGIQEDRISSLINKMIVNNSVIVAGEGIIGRAAFTGSHQWILLNNFTKDAYPPEVYAEVHHQFSAGMQTVTVIPVLPHGVVQLGSFFPIMENIGFVNDVKSLILQLGCIPGALLSEDYSAKLSNERLAGPATAGVPVYLNPPVITSNSTPSVANGSNQQCNSSHASRPTVQTPCPLRGEINTCQGSELTPQTHNLNQISNNICQAKLISMSKTGFPGQRENRAVEAEVIPSNFGSCLQQQSVSYNARSTFNHLSGSGPLGQSGLSDHSLKYMEQQIMSAIGNRDHVNPCINASSTVNMSQPKTDGGHILSHNLSSGSTSLLRGIPVHGGMSSLLRKNLITSSKSPKLYAGDLSCKQEVGIGLQNDDSTKAGGYSLANLTSQSGTFPMPLEGSDQKILPVDIKSASTDQKIHYDLLQAPNIPSFHVEEHVPYSGQIPGFVHDCLDKDGTSQSIMTMNPKHEQACAQPPSGDDLFDVLGVDFKNKLLNGKWNKLLPDEPDANAENMVKKETCMNMQGTNSDCYSVHETISDSGIFSGMGTDHLLDAVVSKAKPVVKQNSDDMSCRTTLTVNSTSSVPSPACKQVMSGQIPGGLFDFPKNGGKIGAVETSSLRSGCSKDDAGNCSQTTSIYGSQLSSWVENGGNVKCENSVSTGYSKRSNDGCKPNRKRLKPGENPRPRPKDRQMIQDRVKELREIVPNGAKCSIDALLERTIKHMLFLQSVTKHADKLKQTGESKMISKEGGLLLKDNFEGGATWAYEVDSQSLVCPIIVEDLNAPRQMLVEMLCEDRGFFLEIADLIRGLGLTILKGVMEAHNDKIWARFAVEANRDVTRMEIFMSLVRLLEQMVKGDASSSNAIDNMMVYHSFPQATQIPATGSLQ. 950
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g05323 949 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 946 IPR043561 GO:0003700|GO:0006355
Seca4g05323 949 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 740 789 IPR011598 GO:0046983
Seca4g05323 949 MobiDBLite consensus disorder prediction 721 754 - -
Seca4g05323 949 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 5 175 IPR025610 -
Seca4g05323 949 CDD bHLH_AtLHW_like 744 813 - -
Seca4g05323 949 MobiDBLite consensus disorder prediction 221 246 - -
Seca4g05323 949 MobiDBLite consensus disorder prediction 731 754 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g05323 Seca-Chr4 99854257 99861635 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g05323 543 937 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 52.369 5.45e-112 357
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g05323 - - gmx:100787748 1449.11