Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g05295 ATGCCTTACAACCATGTCATAAATAATACCTTAAAAGTAATATTTGTTTATCATCTGCAGGCTGAAGTTGAAAATCTTACAATAGAGGAGCACCGTTTAGATGAACAAACAAGGGAGGTTCAAGAAAGACTAAGGGATCTTAGTGAAGATGAAAATAATCAGAAATATCTTTTTGTTACTGAGGAAGATATAAAGAGCTTGCCCTGCTTCAAGGATGAAACCCTGATAGCAATTAAAGCTCCACATTGCACCACTTTGGAGGTCCCTGATCCTGATGAGGCTGTTGATTATCCCCAGAGGAGATACAGGATTGTCCTGAGAAGCACAATGGGCCCAATAGATGTATACCTTATTAGGTATGATTACTTTTTTTGTGGGTCTGAACTCATTTACCTCAAGTCAATGATCTTGATGCTTGGAAAATGCAATAAATTTGACATTCTTGATCTCCTCTGTTCTCCCTGCCATTCTAGTCAATTTGAAGAAAAGTTTGAGGAGATTAATGGTGTTGATGAGGCACCCAATGTTTCATCCAGTCCAGAGTTTAACAAACATCAATCAATAGTGGCATCAGAGGATAGAGGGAAGGACCTAGATATACAGGAACAAGATGTTCATGAGCCTAGTTCAGATTTTCCTACTTCACAGGACTCTGTGAGTGGGATCTTGAAGATTGTTCCTTCAGATTTTGATAGTGGTGCTGATTACTGGCTTTTATCTGATGCTGATGTTAGCATAACGGATATGTGGAGAACAGAACCCAGTGTTGAATGGAATAATCTGTATACAGTTCAAGAAGACCATTGTATGACTCACGTGAGCCCACCACCACCACCCCAAACTCCTCTTTCCAACGTAAGTGAAGTGCCGGCTTCTAACCCTACTGGACTGGAGGTTGATGTGTAA 906 0.4029 MPYNHVINNTLKVIFVYHLQAEVENLTIEEHRLDEQTREVQERLRDLSEDENNQKYLFVTEEDIKSLPCFKDETLIAIKAPHCTTLEVPDPDEAVDYPQRRYRIVLRSTMGPIDVYLIRYDYFFCGSELIYLKSMILMLGKCNKFDILDLLCSPCHSSQFEEKFEEINGVDEAPNVSSSPEFNKHQSIVASEDRGKDLDIQEQDVHEPSSDFPTSQDSVSGILKIVPSDFDSGADYWLLSDADVSITDMWRTEPSVEWNNLYTVQEDHCMTHVSPPPPPQTPLSNVSEVPASNPTGLEVDV. 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g05295 301 Coils Coil 23 53 - -
Seca4g05295 301 PANTHER TRANSCRIPTION FACTOR E2F 19 256 IPR015633 GO:0000978|GO:0006357
Seca4g05295 301 CDD E2F_DD 18 118 IPR032198 GO:0046983
Seca4g05295 301 SUPERFAMILY E2F-DP heterodimerization region 18 118 IPR037241 -
Seca4g05295 301 MobiDBLite consensus disorder prediction 273 301 - -
Seca4g05295 301 Pfam E2F transcription factor CC-MB domain 19 119 IPR032198 GO:0046983
Seca4g05295 301 Gene3D - 15 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g05295 Seca-Chr4 99136747 99139198 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g05295 14 278 E2F-DP Transcription Factor Family AT2G36010 45.985 2.00e-69 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g05295 K06620 - gmx:100819817 332.798
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g05295 4 99136747 99139198 Seca4g05295 4 99136747 99139198 ECH