Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g05279 ATGGAGGAGTGTTGCGCTCTCTGTGAGAGGAAGGCGGTGATGCAGTGTGATTCAGACCAGGCTAAGTTATGCTGGGAATGCGATGAGAAAGTTCACAGCGCTAATTTCTTGGTAGCGAAGCACTTGAGGGTCCTTTTATGCCGTCAATGCTTTTCTCTCACTCCGTGGAAAGGCTCTGGTCCTAGGCTCACACCCACTGTTACATTCTGTCATCGCTGCTTTGCAGCTCGTCGCGCTAGGCTCCGTCAAGCGGTGCGTGATCATCATCGTGATTATGTGGATGATGATGGTGAGTATAGTTCTGATGATAGTTATGATGATGACGGCGACGATGATGATGGTGGTGATAATAATGACGGAGAAGAAGAAGAGGAAGAGGATGAAGAAGCAGAGAATCAAGTGGTGCCAATGTCCTCTGCTTCTGCCTGGTCACCACCTAGTGCTGATGGTTTAGCATTTAAGCGGTCGCGAGATAACTCTTTCTCGATCGATTCTCAGGGTGAGACAGGGTGTTCTTCATCTGAGATGGTTTCTGCAGCATTCAACAGTAGTGATGAATCAACCTCTATCAGCTTCTTCAGGCCAATGAAGGAGCGTCGGATTAATTAA 609 0.4795 MEECCALCERKAVMQCDSDQAKLCWECDEKVHSANFLVAKHLRVLLCRQCFSLTPWKGSGPRLTPTVTFCHRCFAARRARLRQAVRDHHRDYVDDDGEYSSDDSYDDDGDDDDGGDNNDGEEEEEEDEEAENQVVPMSSASAWSPPSADGLAFKRSRDNSFSIDSQGETGCSSSEMVSAAFNSSDESTSISFFRPMKERRIN. 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g05279 202 MobiDBLite consensus disorder prediction 158 188 - -
Seca4g05279 202 MobiDBLite consensus disorder prediction 92 188 - -
Seca4g05279 202 CDD Bbox1_BBX-like 4 46 - -
Seca4g05279 202 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 4 180 - -
Seca4g05279 202 SMART bboxneu5 1 46 IPR000315 GO:0008270
Seca4g05279 202 MobiDBLite consensus disorder prediction 97 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g05279 Seca-Chr4 98778324 98779617 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g05279 1 79 C2C2-CO-like Transcription Factor Family AT4G27310 59.494 2.70e-27 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g05279 - - gmx:100818267 166.392