Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca4g05273 | ATGTCAAAAACTTCCACTTCACTAGACACTTTATCAGTGAATGAATCTATCCAAGATGGGGAGACTTTAGTTTCAGCAGGTGGAATTACTGAAGTGGGTTTCTTTAGCCCAGGAAATACAACACGTCGATACTTGGCTGTATGGTTCAGGAATGTATCCCCAACAACAGTGATATGGGTGGCCAACCGAGAAACACCTCTCCACAATAACTCAGGATTTTTAAAACTCAATGAAGAAGGGATTCTTCAACTTCTCAATGGCACAAACAGCATTATTTGGTCATCCAATATATCAAGCAAGGCAGGGAGTAATCCAATTGCTCAGATCTTGGATTCAGGAAACTTTGTAGTGAAAAATGGACAGGAAACTAACAAGGACAACTTTTTTTGGCAGAGTTTTGATTATCCTTGCGATACATTGTTGCCAGGAATGAAGCTTGGATGGAACTTGCAAACTGGTCAAGAAAGATTTCTGTCATCTTGGAAAAGTGCTGATGATCCTGCCAAGGGAGAATATACTTTGAGAATTGACCTTAGAGGATATCCCCAATTAATTAAATTCAGGGAAACTGATATACATGTTAGAGCAGGGTCATGGAATGGCCAGTCTATGACTGAATATCCACTTCCAACTCCTGGAGTTTTACAAACATTTGTGTTCAATGAAAAAGAAGTGTATTATGAGTTCGAGATTCTTTACAAATCGACCTTCAGCACATATACACTTACCGTACCAGGTGCCGGGCAGAGTTATTTCTGGACAACTGAACAAGACATCAGGGAAGCCACCTCAATTGTGGAGGAGGATCAGTGCGAAAATTATGCCACTTGTGGTTCAAATTCTGTATGCAATATTGATGGGAACCATCTAACTTGTGAATGCCTGAAAGGATATGTCCCCAAGTTTATTGAACAATGGAATGTATCAGTTTGGTCTAACGGTTGTGTTCCAAGGAATAAATCTACTTGTGGAAACAGGTACGCAGATGGCTTCTTGAAGTACAGAGGAATGAAATTGCCAGACACGTCTTCGTCATGGTTTAATAAGACCATGAACCTTGAGGAATGTCAGAAATCATGTCTGAAAAACTGTTCATGTGTAGCATATGCAAATTTAGATATCCGTAATGGAGGAAGTGGTTGTCTACTCTGGTTTAACAATCTGGTTGACGTGAGGAAATTCTCTCAATGGGGACAAGATCTTTATGTCAGAGTCCCTGCTTCAGAACTAGATTCAAACATGACAATTACATTTGGTAAGCATGAAAATAGGAAGAGTAGTATACTTCCAACTGTCATACCGATCTCATTATTTCTAATACTGCTTATACCTGGTCTATTCGTTTACTGGACTAGAAGGCAGAGGAAAGGGGAAGATTTGCTACATTTTGATGTAGGCATGAGCATGAAAGTTAAAGACACAGAGTTTACTGAAATAGATAAGGGTTCGAAAGTTAAGAAGAAGGAAGTCAAATTGCCATTATTCAGTTTTGGGAGCGTTTCAGCTGCAACTAATAACTTTTCAGATGCAAATAAACTTGGTGAGGGTGGCTTTGGACCTGTTTACAAGGGTAAATTATTGAATGGGGATGAGGTTGCTGTAAAAAGACTATCCCGGAGATCTGGTCAAGGATGGGAGGAGTTGAGAAATGAAGCCTTGTTGATTGCAAAACTCCAACATAATAATCTTGTTAGACTTTTAGGTTGCTGCATTGATCGAAATGAAAAGATGCTGATTTATGAATATATGCCTCATAAAAGCTTGGATGGTTTTCTTTTTGATGCAACAAAAAGAAGGATGCTAGATTGGGGAACACGAGTTCGAATAATTGATGGCATTGCCCAAGGACTCCTTTATCTTCATCAGTATTCAAGGTTCCGGATCATTCATAGAGATTTAAAAGCTAGCAACATATTGTTAGACATCAACATGAATCCTAAAATATCAGATTTTGGAATGGCGAGAATGTTTGGTGAAAATGAACTTCAAGCAAATACAAACCGGATAGTTGGAACTCATGGCTACATGTCCCCTGAATATGCTCTAGAAGGTCTTTTCTCAATAAAATCTGACGTGTTTAGCTTTGGGGTCCTGTTGTTAGAGATTTTGAGTGGCAAGAAGAATACCGTTTTTATCAAACAAACTCCCTCAATCTCCTTGCTTATCCATCTCAAAAACATGCATTATTTAGACACTGCTTGGGATCTATGGACAAGTAATTCGGCAATGGACCTTATAGATCCAACATTGGAAGATATCTCCAATAAGCATGTAGTGCCAAGATATGTGAACATAGGACTTCTTTGTGTCCAAGATAGTCCAACAGATAGGCCAACCATGTCTGATGTTGTATCAATGATTGGCAATGACACTGCGGCCCTTCCTCGTCCAATGCCACCTGCATTTCTAAATGTGAGAGGTAATGATAATTCAAGATTGGCCAGAAGTGAAGAAGAAAACCTTTCTGTGAATATTATCACAGATTCACTTGTGGAACCAAGATGA | 2505 | 0.3916 | MSKTSTSLDTLSVNESIQDGETLVSAGGITEVGFFSPGNTTRRYLAVWFRNVSPTTVIWVANRETPLHNNSGFLKLNEEGILQLLNGTNSIIWSSNISSKAGSNPIAQILDSGNFVVKNGQETNKDNFFWQSFDYPCDTLLPGMKLGWNLQTGQERFLSSWKSADDPAKGEYTLRIDLRGYPQLIKFRETDIHVRAGSWNGQSMTEYPLPTPGVLQTFVFNEKEVYYEFEILYKSTFSTYTLTVPGAGQSYFWTTEQDIREATSIVEEDQCENYATCGSNSVCNIDGNHLTCECLKGYVPKFIEQWNVSVWSNGCVPRNKSTCGNRYADGFLKYRGMKLPDTSSSWFNKTMNLEECQKSCLKNCSCVAYANLDIRNGGSGCLLWFNNLVDVRKFSQWGQDLYVRVPASELDSNMTITFGKHENRKSSILPTVIPISLFLILLIPGLFVYWTRRQRKGEDLLHFDVGMSMKVKDTEFTEIDKGSKVKKKEVKLPLFSFGSVSAATNNFSDANKLGEGGFGPVYKGKLLNGDEVAVKRLSRRSGQGWEELRNEALLIAKLQHNNLVRLLGCCIDRNEKMLIYEYMPHKSLDGFLFDATKRRMLDWGTRVRIIDGIAQGLLYLHQYSRFRIIHRDLKASNILLDINMNPKISDFGMARMFGENELQANTNRIVGTHGYMSPEYALEGLFSIKSDVFSFGVLLLEILSGKKNTVFIKQTPSISLLIHLKNMHYLDTAWDLWTSNSAMDLIDPTLEDISNKHVVPRYVNIGLLCVQDSPTDRPTMSDVVSMIGNDTAALPRPMPPAFLNVRGNDNSRLARSEEENLSVNIITDSLVEPR. | 835 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca4g05273 | 834 | PANTHER | BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN | 8 | 778 | - | - | |
Seca4g05273 | 834 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase | 3 | 133 | - | - | |
Seca4g05273 | 834 | Pfam | Protein tyrosine and serine/threonine kinase | 511 | 786 | IPR001245 | GO:0004672|GO:0006468 | |
Seca4g05273 | 834 | ProSiteProfiles | Protein kinase domain profile. | 507 | 794 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca4g05273 | 834 | SUPERFAMILY | Protein kinase-like (PK-like) | 491 | 810 | IPR011009 | - | |
Seca4g05273 | 834 | ProSiteProfiles | PAN/Apple domain profile. | 323 | 406 | IPR003609 | - | |
Seca4g05273 | 834 | Gene3D | - | 2 | 133 | IPR036426 | - | |
Seca4g05273 | 834 | CDD | PAN_AP_plant | 320 | 406 | - | - | |
Seca4g05273 | 834 | Gene3D | Hepatocyte Growth Factor | 323 | 402 | - | - | |
Seca4g05273 | 834 | Pfam | D-mannose binding lectin | 56 | 162 | IPR001480 | - | |
Seca4g05273 | 834 | SUPERFAMILY | alpha-D-mannose-specific plant lectins | 57 | 167 | IPR036426 | - | |
Seca4g05273 | 834 | Pfam | S-locus glycoprotein domain | 195 | 302 | IPR000858 | GO:0048544 | |
Seca4g05273 | 834 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 628 | 640 | IPR008271 | GO:0004672|GO:0006468 | |
Seca4g05273 | 834 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase | 583 | 795 | - | - | |
Seca4g05273 | 834 | CDD | STKc_IRAK | 513 | 787 | - | - | |
Seca4g05273 | 834 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase | 322 | 405 | - | - | |
Seca4g05273 | 834 | Gene3D | Phosphorylase Kinase; domain 1 | 481 | 582 | - | - | |
Seca4g05273 | 834 | Gene3D | Transferase(Phosphotransferase) domain 1 | 583 | 793 | - | - | |
Seca4g05273 | 834 | PIRSF | SRK | 1 | 834 | IPR024171 | GO:0004674 | |
Seca4g05273 | 834 | CDD | B_lectin | 14 | 136 | IPR001480 | - | |
Seca4g05273 | 834 | ProSiteProfiles | Bulb-type lectin domain profile. | 8 | 130 | IPR001480 | - | |
Seca4g05273 | 834 | SMART | ntp_6 | 326 | 405 | IPR003609 | - | |
Seca4g05273 | 834 | Pfam | PAN-like domain | 326 | 391 | IPR003609 | - | |
Seca4g05273 | 834 | SMART | blect_4 | 14 | 136 | IPR001480 | - | |
Seca4g05273 | 834 | FunFam | Uncharacterized protein | 483 | 582 | - | - | |
Seca4g05273 | 834 | SMART | serkin_6 | 507 | 787 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca4g05273 | Seca-Chr4 | 98670825 | 98677562 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca4g05273 | 419 | 802 | Receptor kinase-like Gene Family | AT4G23230 | 48.438 | 3.40e-116 | 365 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_DLSV | Seca4g05273 | PK_Tyr_Ser-Thr | 4.1e-47 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca4g05273 | - | - | gmx:100815430 | 951.429 |