Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g05270 ATGAATCCTAAAATATCAGATTTTGGAATGGCGAGAATATTTGGCGAGAATGAACTTCAAGCAAACACAAACCGGATAGTTGGAACTTATGGCTACATGTCCCCTGAATATGCTCTGGAAGGCCTTTTCTCAATAAAATCCGACGTGTTTAGCTTTGGGGTCCTTTTGTTAGAGATTGTGAGTGGCAAGAAGAATACCGGTTTTTATCAAACAAACTCCCTCAATCTCCTTGCTTATGCTTGGGATTTATGGACAAGTAATTCAGCAATGGAGCTTATGGATCCAACACTGGAAGATATCTCCAATAAGCATGTAGTGCCAAGATATTTGAACATTGGACTTCTCTGTGTCCAAGATAGTCCAGCAGATAGGCCAACCATGTCTGATGTTGTATCAATGATTGGCAATGACACTGCGACCCTTCCTTGTCCAATGCCACCTGCATTTCTAAATGTGAGAGGTAATGAGAAATCAAGATTGGCCAGAAGCACTGAAGAAAACCTTTCTGTGAATGTTATAACAGATACACTTGTGGAACCAAGATGA 546 0.4066 MNPKISDFGMARIFGENELQANTNRIVGTYGYMSPEYALEGLFSIKSDVFSFGVLLLEIVSGKKNTGFYQTNSLNLLAYAWDLWTSNSAMELMDPTLEDISNKHVVPRYLNIGLLCVQDSPADRPTMSDVVSMIGNDTATLPCPMPPAFLNVRGNEKSRLARSTEENLSVNVITDTLVEPR. 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g05270 181 FunFam Uncharacterized protein 33 143 - -
Seca4g05270 181 Gene3D Transferase(Phosphotransferase) domain 1 1 140 - -
Seca4g05270 181 Pfam Protein tyrosine and serine/threonine kinase 4 133 IPR001245 GO:0004672|GO:0006468
Seca4g05270 181 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 1 156 - -
Seca4g05270 181 ProSiteProfiles Protein kinase domain profile. 1 141 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca4g05270 181 SUPERFAMILY Protein kinase-like (PK-like) 2 156 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g05270 Seca-Chr4 98657610 98658705 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g05270 1 150 Receptor kinase-like Gene Family AT4G23250 57.237 6.06e-58 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Seca4g05270 PK_Tyr_Ser-Thr 1.4e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g05270 - - mtr:11407439 303.138