Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca4g05269 | ATGGCACTGACTTCATCTACCCTTGCTCCCTTGCCAATATTAGTGTATGGGCTAAGCTTATTTTGTGTGAATGCAACTACCATAACAAAATTCCTACAAATGGGGCAATCACTGGGAATCTCAGACACCATGGTTTCTGCCAGTGGGAACATCGAACTGGGCTTTTTCAATAGAACCAGAGAGAATTCCACCAAGTACTACGTAGGTATATGGTTTAAAAATGTTCCAAACGACAAGATTATGTGGGTTGCTAACAGAGATTACGCATTTGAAACCTCCTCAGCCGTTCTCACCATTCAATCTGATGGAAACATTGTCATCATAGATGGACCACTGACTTACAGCGTGAGCAGTGTTCCAAACAACTCTAGCACCCACGCTTTGCTCTTGGATTCAGGAAATTTGATACTGTTGAACTACTCGAACGACTTGATTTTGTGGCAGAGTTTTGATAATCCCACGGATACACTTGTGCAGGGAATGCTCGTAGGACAGGAGTTCATTTTGAAATCATGGAAAAGTGCAGAGGACCCTGCTCCAGGAGCATTTTCACTCGTATATGATTTTCACAATGCGAGTCTAATAGTCCACAAGGGTTCTAATGTATTCTTCGTTGATAACAATTCGGATCGGAATCGGAATCGGAACAAGGACTTTATCATTTGGCCAGGTGATAGCAATTCTCGAGTGGTATTAGAAGTGTCTGGGGATCTTAACTACCAGAAATGGTCAGAGAAAGCTAAGCGTTGGGTTTCTCTACAGTCATCCAAGTGCGGAACGAACAATTCGTGTGGAGATTTTTCCATTTGTAATCCGCAGCTAGAAGCTCTTGAACCTTGTCACTGTCTTGACGGTTTTGAACCGTTGGATGCTGATTCTTGGAGGCAGAGGAACAGATCCGGTGGATGTGTCAGGAGAAAGGAGTTGTCCTGCAGTAAAACAAATGTTTTGTCTATGGTGGAGTTACCTTCAACTTCAAGTGAAGTTATGCTAAAGATGGATACAGCAGCGAGATGTGAACGCACTTGCTTTAACGATTGTTCTTGTGTTGCTTATGCTTATGATTTTAACAGTTACTGTTGGTTATGGCATGACCACTTATTTGGTCTGAAGAATGTCTCAGGTGATGTCGAAAATGTTAATAATACATGGTTTTATCTCAGACTTGCTGCCTCTGAGATTGATTCAAACATAAGGAATGCACTTGGCAGGCATGAAAACAGGAAGAGGAGTCTACTTCTATTTGTCATACCAATCGCATTTCTAATATTGCATATACTGGGCCTATTTGTTTACTGGACTAAAAGGCAGAGGAAAGTAGGGGAAGATTTGCTACATTTTGATGTACGCATGGGCATGAATGTTAAAGACACAGAGTTTACTGAAAGAGATAAGGGCTTAAAAGTTAAGAAAAAGGAAGTTAAATTACCATTATTCAGTTTTGGGAGCGTTTCAGCTGCAACTAATAACTTTTCAGATGCAAATAAACTTGGTGAGGGTGGCTTTGGACCTGTTTACAAGGCATGTTCCATAGGTAAATTATTGAATGGGGATGAGGTTGCTGTAAAAAGGCTATCCCGAAGATCTGGTCAAGGATGGGAGGAGTTGAGAAATGAAGCCTTGTTGATTGCAAAACTCCAACACAATAACCTTGTTAGACTTTTGGATGCAACAAAAAGAAGGATGCTAGATTGGGAAAACACGGGTTCGAATAATTGA | 1719 | 0.4113 | MALTSSTLAPLPILVYGLSLFCVNATTITKFLQMGQSLGISDTMVSASGNIELGFFNRTRENSTKYYVGIWFKNVPNDKIMWVANRDYAFETSSAVLTIQSDGNIVIIDGPLTYSVSSVPNNSSTHALLLDSGNLILLNYSNDLILWQSFDNPTDTLVQGMLVGQEFILKSWKSAEDPAPGAFSLVYDFHNASLIVHKGSNVFFVDNNSDRNRNRNKDFIIWPGDSNSRVVLEVSGDLNYQKWSEKAKRWVSLQSSKCGTNNSCGDFSICNPQLEALEPCHCLDGFEPLDADSWRQRNRSGGCVRRKELSCSKTNVLSMVELPSTSSEVMLKMDTAARCERTCFNDCSCVAYAYDFNSYCWLWHDHLFGLKNVSGDVENVNNTWFYLRLAASEIDSNIRNALGRHENRKRSLLLFVIPIAFLILHILGLFVYWTKRQRKVGEDLLHFDVRMGMNVKDTEFTERDKGLKVKKKEVKLPLFSFGSVSAATNNFSDANKLGEGGFGPVYKACSIGKLLNGDEVAVKRLSRRSGQGWEELRNEALLIAKLQHNNLVRLLDATKRRMLDWENTGSNN. | 573 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca4g05269 | 572 | Pfam | Protein tyrosine and serine/threonine kinase | 495 | 559 | IPR001245 | GO:0004672|GO:0006468 | |
Seca4g05269 | 572 | ProSiteProfiles | PAN/Apple domain profile. | 311 | 390 | IPR003609 | - | |
Seca4g05269 | 572 | Pfam | PAN-like domain | 316 | 368 | IPR003609 | - | |
Seca4g05269 | 572 | SMART | blect_4 | 29 | 153 | IPR001480 | - | |
Seca4g05269 | 572 | ProSiteProfiles | Bulb-type lectin domain profile. | 29 | 150 | IPR001480 | - | |
Seca4g05269 | 572 | PANTHER | BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN | 17 | 558 | - | - | |
Seca4g05269 | 572 | SUPERFAMILY | Protein kinase-like (PK-like) | 473 | 558 | IPR011009 | - | |
Seca4g05269 | 572 | Gene3D | Phosphorylase Kinase; domain 1 | 452 | 561 | - | - | |
Seca4g05269 | 572 | Pfam | S-locus glycoprotein domain | 218 | 288 | IPR000858 | GO:0048544 | |
Seca4g05269 | 572 | Pfam | D-mannose binding lectin | 80 | 166 | IPR001480 | - | |
Seca4g05269 | 572 | Gene3D | - | 24 | 150 | IPR036426 | - | |
Seca4g05269 | 572 | CDD | B_lectin | 36 | 153 | IPR001480 | - | |
Seca4g05269 | 572 | SUPERFAMILY | alpha-D-mannose-specific plant lectins | 80 | 176 | IPR036426 | - | |
Seca4g05269 | 572 | CDD | PAN_AP_plant | 309 | 390 | - | - | |
Seca4g05269 | 572 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase | 24 | 150 | - | - | |
Seca4g05269 | 572 | ProSiteProfiles | Protein kinase domain profile. | 491 | 572 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca4g05269 | Seca-Chr4 | 98655175 | 98657512 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca4g05269 | 419 | 555 | Receptor kinase-like Gene Family | AT4G23190 | 47.445 | 3.95e-24 | 104 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_DLSV | Seca4g05269 | PK_Tyr_Ser-Thr | 2.3e-06 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca4g05269 | - | - | gmx:100811148 | 639.417 |