Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca4g05250 | ATGTTTCTAGGTAATGATCAACAGGGTGTACTAGCAAATGGGACAGAGATTGCTGTCAAGCGGCTTTCCATGAAATCTGGACAAGGACCACAGGAGTTCAAGAATGAAGTGCTGTTGATTGCCAATCTTCAGCATCGAAATCTGGTGAAACTTCTCGGTTGTTGCATTCAGAATGATGAAAGAATCCTAATCTATGAATACATGCCTAACAGAAGTTTGGACAACTTCATTTTTGATCAAACAAGAAACAAAGTATTGGATTGGAGTACACGCTTACATATTGTAAGTGGGATTGCTCGAGGGCTTCTCTATCTCCATCAAGATTCTAGACTAAGGATCATCCACAGAGATCTAAAAACCAGTAACATTCTTCTTGATAATGATATGAACCCAAAAATATCAGACTTTGGTCTGGCCAGGGTTTTTGGTGGTGATCATGCTGAGGCCAATACAATAAGAGTAGTGGGAACATATGGTTACATGCCCCCTGAGTATGCAGTGTATGGTTCTTTTTCAGTGAAGTCTGATGTGTTTAGCTTTGGTGTTATTGTACTGGAGATGGTTAGTGGCAGAAAGAACAGAGAATTTTCTGACCCACAACATAGTCTTAACCTTCTTGGACATGCATGGAGACTGTGGAGTGAGGATAGACCATTGGAGCTGATAGATGATTCCCTTAGTGATTCAGTTATTTTGGCTGAGGCATTAAGATGTATTCACATAGGGCTCCTGTGTGTGCAAGAGAGACCAGATGATAGGCCAGACATGTCATCTGTTGTTCTAATGTTGAATGGTGAGAAACCATTGCCTAATCCAAGGCAGCCTGGGTTTTATCCACATGAAGTTGTCTCTTCCTCAAGCAAACAAGAACTATCTTCAACAAATGAACTTTCCATTTCATTGTTACAGGCAAGATAG | 918 | 0.4074 | MFLGNDQQGVLANGTEIAVKRLSMKSGQGPQEFKNEVLLIANLQHRNLVKLLGCCIQNDERILIYEYMPNRSLDNFIFDQTRNKVLDWSTRLHIVSGIARGLLYLHQDSRLRIIHRDLKTSNILLDNDMNPKISDFGLARVFGGDHAEANTIRVVGTYGYMPPEYAVYGSFSVKSDVFSFGVIVLEMVSGRKNREFSDPQHSLNLLGHAWRLWSEDRPLELIDDSLSDSVILAEALRCIHIGLLCVQERPDDRPDMSSVVLMLNGEKPLPNPRQPGFYPHEVVSSSSKQELSSTNELSISLLQAR. | 306 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca4g05250 | 305 | Gene3D | Transferase(Phosphotransferase) domain 1 | 68 | 269 | - | - | |
Seca4g05250 | 305 | ProSiteProfiles | Protein kinase domain profile. | 1 | 277 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca4g05250 | 305 | SUPERFAMILY | Protein kinase-like (PK-like) | 12 | 286 | IPR011009 | - | |
Seca4g05250 | 305 | Gene3D | Phosphorylase Kinase; domain 1 | 2 | 67 | - | - | |
Seca4g05250 | 305 | PIRSF | ILK | 8 | 217 | - | - | |
Seca4g05250 | 305 | PIRSF | ILK | 231 | 265 | - | - | |
Seca4g05250 | 305 | CDD | STKc_IRAK | 9 | 265 | - | - | |
Seca4g05250 | 305 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase | 68 | 271 | - | - | |
Seca4g05250 | 305 | FunFam | Cysteine-rich receptor-like protein kinase 11 | 3 | 67 | - | - | |
Seca4g05250 | 305 | SMART | serkin_6 | 2 | 261 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca4g05250 | 305 | Pfam | Protein tyrosine and serine/threonine kinase | 13 | 260 | IPR001245 | GO:0004672|GO:0006468 | |
Seca4g05250 | 305 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 113 | 125 | IPR008271 | GO:0004672|GO:0006468 | |
Seca4g05250 | 305 | PANTHER | PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA | 8 | 303 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca4g05250 | Seca-Chr4 | 98209053 | 98210698 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca4g05250 | 3 | 277 | Receptor kinase-like Gene Family | AT4G23230 | 59.783 | 2.48e-120 | 357 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_DLSV | Seca4g05250 | PK_Tyr_Ser-Thr | 2.1e-41 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca4g05250 | - | - | gmx:106794307 | 461.84 |