Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g05238 ATGACAGGAGAAAATAAAGGTATGGAAATGAGTGGTGAAGAATATGTCATTAATGGGCTGCAAGATTTTTCAAACGTTAATTGGAAGGGTATTAATAAGGAACAATTTTTGAAATATCATTTTTTAGATCGTGAGATTGATTCTAAATTTTACAATTGGTATGCTAGAGTGAAAGGTTTTTCGGCTCGAAAACATAATGTAGGAAAGGTGAAAGGAAAAGGTATTGTGTGTCAAACTTTTGTATGCTCTAGATACGGGAAGCATATACCAAAGTTGGGGGGCTATAAACGAAAACCAAAAAGAATTGTTAAGTGTGATTGTAAATCTGTTTGTAAGGTTCGTTTGAATGGAGCTACTAATAGGTGGCATGTGATGTTACTCAGGGATGATCACAACCATGAGATGTTAGATGAGAGGTTCCATGGCATGTTACCCTCACATAGGAGGATGGATGATGATGAAATCAAGCAAATGAATGAGATGAGATCTGTTGGTATAAGCACACCTAGCATTTACCAAACATTTGCTCATAGGGGTGGTGGTTTTGACAATGTTGGATTCAATACACGGGACATGTATAATGAGTTAGAAAAGCAACGGAAGATGAAAAGTAATGATGCTACTGAGGCTTTGGAATTCCTTGAAGGGTTGGGTAGAAATGATTCGCAAATGTTTTATAGACATAGGGTAGATGATGAAGGAAGATTACAACATTTGTTTTGGTGTGATGGTTTGAGTTAA 741 0.3644 MTGENKGMEMSGEEYVINGLQDFSNVNWKGINKEQFLKYHFLDREIDSKFYNWYARVKGFSARKHNVGKVKGKGIVCQTFVCSRYGKHIPKLGGYKRKPKRIVKCDCKSVCKVRLNGATNRWHVMLLRDDHNHEMLDERFHGMLPSHRRMDDDEIKQMNEMRSVGISTPSIYQTFAHRGGGFDNVGFNTRDMYNELEKQRKMKSNDATEALEFLEGLGRNDSQMFYRHRVDDEGRLQHLFWCDGLS. 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g05238 246 PANTHER OS01G0519700 PROTEIN 34 245 - -
Seca4g05238 246 Pfam FAR1 DNA-binding domain 49 136 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g05238 Seca-Chr4 97877894 97878634 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca4g05238 FAR1 3.8e-16 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g05238 - - tpra:123915148 213.001