Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g05221 ATGGCTGAATCAGAGTTCATTAGCTTCATAACAGGGGAGGCATCTAACAAGTGCCAGAAAGAGAAGAGGAAGAATGATCTTCTATGGGCCATGATCACTCTGGGCTTTGAAGAGTGCTATGTGGAGCCTCTGAAGGTTTACCTCCAAAAGTATAGGGAATTGGAGGGAGAGAAGAATTCCATCAATGGGAGTGGGAGGCAGCAGGATGGTGCATGGTCAATGCCATCATCATCATAA 237 0.4599 MAESEFISFITGEASNKCQKEKRKNDLLWAMITLGFEECYVEPLKVYLQKYRELEGEKNSINGSGRQQDGAWSMPSSS. 79
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g05221 78 MobiDBLite consensus disorder prediction 60 78 - -
Seca4g05221 78 Gene3D Histone, subunit A 1 75 IPR009072 GO:0046982
Seca4g05221 78 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 4 63 IPR027113 GO:0001228|GO:0006355|GO:0016602
Seca4g05221 78 MobiDBLite consensus disorder prediction 58 78 - -
Seca4g05221 78 SUPERFAMILY Histone-fold 4 69 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g05221 Seca-Chr4 97484762 97484998 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g05221 4 69 CCAAT-HAP3 Transcription Factor Family AT4G14540 74.286 1.19e-29 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g05221 K08065 - vvi:100261380 103.605