Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g05185 ATGCCAGCAAGCTTCCACCACCATGGGGTGTGGTATGAATCGATTTTGAAATCGATCTCTGACTCAGCAGAAATGCTCTACACCTACAACAATGCAATTCATGGATTCTCTACAAGGATAACAACTAAAGAAACTCGATTACTAAAGAGCCAAATCGGGGTTTTAAAGGTGTTTCCAGATAAACAATACAAGATTCACACAACAAGAACCCCACATTTCCTTGGCCTCGACAAAATCCAGGGCACGTTCCTTGAGACAAGAAGCAAAGCAGGTAGTGATGTAATTGTTGGACTCCTCGATACTGGTGTTTGGCCTGAAAGCAAGAGCTTTGACGATACTGGATTTGGACCCATCCCGAGTAGTTGGAAAGGAAAATGTGAAACAGGTACCAATTTCACAACCTCGAACTGTAATAAGAAATTGATTGGAGCGAGGTTGCTTGATGAGTCTAAGGGTTCTATATCGCCTCGAGATGACGAGGGTCATGGCACCCATACTGCAAGCACAGCTGCAGGGTCTCCAGTGCAAAACGCGAGCCTTTATGGCTATGCTAATGGAACTGCACGTGGGATGGCCCCAAGCGCTAGAGTTGCTATGTACAAGGTTTGTTGGAATGAATCCTGTGCTGTTTCTGATATATTGGCTGCAATTGACCAGGCCATCATTGATAATGTCAATATCATTTCCATTTCACTCGGTGGTGAACAATCTGAGTACTATGACGACCCTGTTGCAATCGCAGCCTTTTCGGCAATGGAGCATGGGATTATAGTCTCTTGCTCTGCAGGAAACGATGGTCCCGTACCTGGCAGTACTACCAATATAGCACCTTGGATGACCACCGTGGGAGCTGGCACACTCGATCGAGATTTTCCTGCATACGTTAGCCTAGGAAATGGAAAGCATTATTCTGGAGTGTCCCTTTATAATTATGGCAATAATCCTTTGCCAAATCATCCATTACCATTCATATATGCAGGCAATGCAAGCAAAGAAAGGTCCTCCAAGTTTAGTTCTAGATTGTGCTTGCCGGATAGCTTGGCGCCAGAAAAAGTTAAGGGAAAGATTGTGTTGTGTGATTATGAACAAGATAGTAGGATAGAAAAAGGAAATACGGTGAAATCGATTGGCGGTTTGGGCATGGTGTTGGCTAATAATGCCGCCGCCGAAGGAGATGAACTATTGCCAGATTCCAATATTTTGCCTGAAACTTTGGTGGGCTCAAAAGAAGGTAATGCCATCAAGCAATACTTGTTTTCTAATCCAAAAGCGACGGGTACAATTGTATTTCAGGGAACAAAGCTTGGAATTGAGCCATCGCCGGTTGTTGCATCATTCAGCTCTCGGGGCCCTAATGTTATCACCCCAAAGATACTAAAGCCTGATTTGATCGCGCCAGGTGTCAACATCTTAGCAGCATATTCAAGAAATTCAGATGATAGGCGTGTGGACTTCAACATCATCTCAGGCACGTCCATGTCATGCCCTCATGTGAGTGGGCTAGCGGCTCTAGTCAAGTCGGTTCATCCAGATTGGAGCCCAGCTATGATTCGATCTGCATTGATGACCACGAGTTATACGACTTACATGAATGGTCAGCCATTGTTCGACAGTGCCAACAATAAACCAGCAACACCGTTTGATTATGGCGCTGGACACGTGGACCCTGTTCCTGCACTTAGTCCAGGACTGGTTTATGATCTGACAGTGGATGATTATCTAAGCTTCCTCTGTGCGTTGAACTACACAGCCAATGATATCGAAGTGGTGGCGAGGAGAAAGTATAAGTGTGACCCAAACAAACAATACAGCGTAACAAACCTTAATTACCCTTCATTTGCTGTGGTGAATGGTCCAACAAATGTTAAACACATGCGAACTCTTACCAATGTGGGGCCTGCAGGAACGTACAAGGTATCCGTTAAGTTAGATATCCCAGATGTTAAGATCTCAGTTGAGCCGGAAGTGCTGAGTTTCAAGGAAACAAATGAGAAAAAATCATATATAGTTACATTTTCAGCAGCAAGAATGAAACCGAAGGATCATTATGGTTTTGGACGTTTAGAATGGTCAGATGGAAAACATGTTATCGGAAGTCCGATTGCAATTAGCTGGGCATGA 2121 0.4432 MPASFHHHGVWYESILKSISDSAEMLYTYNNAIHGFSTRITTKETRLLKSQIGVLKVFPDKQYKIHTTRTPHFLGLDKIQGTFLETRSKAGSDVIVGLLDTGVWPESKSFDDTGFGPIPSSWKGKCETGTNFTTSNCNKKLIGARLLDESKGSISPRDDEGHGTHTASTAAGSPVQNASLYGYANGTARGMAPSARVAMYKVCWNESCAVSDILAAIDQAIIDNVNIISISLGGEQSEYYDDPVAIAAFSAMEHGIIVSCSAGNDGPVPGSTTNIAPWMTTVGAGTLDRDFPAYVSLGNGKHYSGVSLYNYGNNPLPNHPLPFIYAGNASKERSSKFSSRLCLPDSLAPEKVKGKIVLCDYEQDSRIEKGNTVKSIGGLGMVLANNAAAEGDELLPDSNILPETLVGSKEGNAIKQYLFSNPKATGTIVFQGTKLGIEPSPVVASFSSRGPNVITPKILKPDLIAPGVNILAAYSRNSDDRRVDFNIISGTSMSCPHVSGLAALVKSVHPDWSPAMIRSALMTTSYTTYMNGQPLFDSANNKPATPFDYGAGHVDPVPALSPGLVYDLTVDDYLSFLCALNYTANDIEVVARRKYKCDPNKQYSVTNLNYPSFAVVNGPTNVKHMRTLTNVGPAGTYKVSVKLDIPDVKISVEPEVLSFKETNEKKSYIVTFSAARMKPKDHYGFGRLEWSDGKHVIGSPIAISWA. 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g05185 706 CDD Peptidases_S8_3 63 526 IPR034197 -
Seca4g05185 706 Pfam PA domain 338 414 IPR003137 -
Seca4g05185 706 Gene3D - 577 705 - -
Seca4g05185 706 PRINTS Subtilisin serine protease family (S8) signature 158 171 IPR015500 -
Seca4g05185 706 PRINTS Subtilisin serine protease family (S8) signature 91 110 IPR015500 -
Seca4g05185 706 PRINTS Subtilisin serine protease family (S8) signature 489 505 IPR015500 -
Seca4g05185 706 ProSitePatterns Serine proteases, subtilase family, serine active site. 490 500 IPR023828 -
Seca4g05185 706 Gene3D - 288 436 - -
Seca4g05185 706 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 22 702 IPR045051 -
Seca4g05185 706 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 2 66 IPR037045 -
Seca4g05185 706 CDD PA_subtilisin_like 294 428 - -
Seca4g05185 706 FunFam Subtilisin-like protease SBT1.5 577 706 - -
Seca4g05185 706 Pfam Subtilase family 91 552 IPR000209 GO:0006508|GO:0008236
Seca4g05185 706 FunFam subtilisin-like protease SBT1.5 288 435 - -
Seca4g05185 706 SUPERFAMILY Subtilisin-like 65 564 IPR036852 GO:0004252|GO:0006508
Seca4g05185 706 Pfam Fibronectin type-III domain 607 703 IPR041469 -
Seca4g05185 706 Gene3D Peptidase S8/S53 domain 93 573 IPR036852 GO:0004252|GO:0006508
Seca4g05185 706 ProSiteProfiles Serine proteases, subtilase domain profile. 62 560 - -
Seca4g05185 706 FunFam Subtilisin-like protease SBT1.5 93 300 - -
Seca4g05185 706 Pfam Peptidase inhibitor I9 5 66 IPR010259 -
Seca4g05185 706 MobiDBLite consensus disorder prediction 151 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g05185 Seca-Chr4 96899474 96901675 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g05185 1 705 Subtilisin-like Serine Gene Family AT5G67360 62.983 0.0 912
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g05185 - - gmx:100815413 954.51