Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g05089 ATGCGAACTCCAAATGCATTCTCTTCCCTAGTTAGCCCTAGAAGCTTCACGTCTCTAGTTAATCTAATGTGCACGGTGAATCCAAAATTTATACTTCATGATTTCGAAACTGTGACGGAGCTGTGCACGGCGACGAGGATAAGTCATGTCCTCATGAGTTCGACAGAGCTGTGCGCCGGCGACCAGGATAGGGCGCGACAACCGAGACGACCATGGCCAGAGCGAGAGCCGCAACGACACATCTCTGTCTTCTCTCGTCACGGCGATGGGAGAAAGCCCGAGGCGGCGGTTGTGCCACCAGAGCAAGCTCGAAAAATTTACCAGGCTCTGAAGGAAAAAGGTGTGCCAGTTGCCCTTGTGGAGTATGAAGGAGAACAACATGGTTTCCGAAAGGCTGAGAACATTAAGTTCACACTTGAACAATCAATGGTCTTCTTTGCGCGATTGATTGGGAATTTCAATGTTGCTGATGATACTATTCCCATCAAACTTGACAACTTTGATTGA 507 0.4852 MRTPNAFSSLVSPRSFTSLVNLMCTVNPKFILHDFETVTELCTATRISHVLMSSTELCAGDQDRARQPRRPWPEREPQRHISVFSRHGDGRKPEAAVVPPEQARKIYQALKEKGVPVALVEYEGEQHGFRKAENIKFTLEQSMVFFARLIGNFNVADDTIPIKLDNFD. 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g05089 168 Gene3D alpha/beta hydrolase 4 159 IPR029058 -
Seca4g05089 168 PANTHER PEPTIDASE S9 PROLYL OLIGOPEPTIDASE 74 162 - -
Seca4g05089 168 Pfam Prolyl oligopeptidase family 98 151 IPR001375 GO:0006508|GO:0008236
Seca4g05089 168 SUPERFAMILY alpha/beta-Hydrolases 97 153 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g05089 Seca-Chr4 94930924 94931812 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g05089 94 168 Carbohydrate Esterase AT5G36210 76.000 3.89e-35 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g05089 - - vum:124848396 139.428