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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Seca4g05082
ATGTGGGATTGGTTTTCAGGTCTGCAAAGGTGTGGGAAGAGTTGCAGATTGAGATGGTTGAATTATCTAAGGCCTAATATCAAAAGAGGGAACTTTACTCAACAAGAAGAGGAATGCATCATCAGAATGCACAAAAAACTGGGCAATAGATGGTCTGCCATTGCGGCTGAGTTGCCTGGAAGAACAGATAATGAAGTAAAGAACCATTGGCATACCACACTCAAGAAGAGAGTTGCAAATGAAAAAGTCAGCAAAGCCTCCAAATCAAAAGATATTGAATCCAAAAGTACCAACAATGATGCTGTTCCTGCTTTTCAAGTTACTCTTCCAACTACTTCCCATATGTCAGAAATCACTGGTCCATTATCTCCTCTATCATCCTCCAGCGAGTTTTCTACAATAACCTCAGATCACACTTCTGCTTCCAGTAATGGAAACTTGTTGCTTGAAGATGATGACTTCAGTTTTCTGGATGCATATATTGGAAGTTTCTGGACAGAGTCATTAATGGCTGATATTTCATCCACTAGTACACAAAGTGAAATAGTACCAGACTATACCAATTGTGCTCTTCAAAATCAAGATGATACCCAGAATAACCTTGATGGTAGTTTATTTTCACCGCACCAATCGTGCAGTGAAAGTTTGGTACTGGAGAATGAGTTTGGCAGTATTCTGGATACATGCACGGAGCCAACAATTGATAATTTTTGGGGACAGCAATATGTGGCCGACATTTGCCACGTTCAAAGTGAAATACTGACACCCTTTGTGGCTGAATCTGAATATTTTTCTACAGTATATGATGCTGAACTTTGGAGTCAAAATAATTTGTATAATCAACATGTTAGCTTATTCCAATGA
864
0.39
MWDWFSGLQRCGKSCRLRWLNYLRPNIKRGNFTQQEEECIIRMHKKLGNRWSAIAAELPGRTDNEVKNHWHTTLKKRVANEKVSKASKSKDIESKSTNNDAVPAFQVTLPTTSHMSEITGPLSPLSSSSEFSTITSDHTSASSNGNLLLEDDDFSFLDAYIGSFWTESLMADISSTSTQSEIVPDYTNCALQNQDDTQNNLDGSLFSPHQSCSESLVLENEFGSILDTCTEPTIDNFWGQQYVADICHVQSEILTPFVAESEYFSTVYDAELWSQNNLYNQHVSLFQ.
288
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Seca4g05082
287
CDD
SANT
31
74
IPR001005
-
Seca4g05082
287
Gene3D
-
6
28
-
-
Seca4g05082
287
PANTHER
MYB DOMAIN PROTEIN 55
7
193
-
-
Seca4g05082
287
ProSiteProfiles
Myb-type HTH DNA-binding domain profile.
24
78
IPR017930
-
Seca4g05082
287
Pfam
Myb-like DNA-binding domain
29
73
IPR001005
-
Seca4g05082
287
SMART
sant
28
76
IPR001005
-
Seca4g05082
287
Gene3D
-
30
102
-
-
Seca4g05082
287
ProSiteProfiles
Myb-like domain profile.
24
74
IPR001005
-
Seca4g05082
287
SUPERFAMILY
Homeodomain-like
9
81
IPR009057
-
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Seca4g05082
Seca-Chr4
94844064
94845634
Dispersed/Tandem
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Seca4g05082
6
100
MYB Transcription Factor Family
AT2G31180
63.918
1.94e-38
134
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
MYB-related
Seca4g05082
Myb_DNA-binding
1.4e-15
CL0123
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Seca4g05082
K09422
-
gmx:100777107
301.982
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