Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g05029 ATGGCGAATGGGTTGGAGAGGGAGAGTGAGTTCACAATGTTCAGTGAGGAGGAGCTGAGCGAGGTGAGTGGGGTGAAGCGTGTTGGTGACTATGTGGAAGTGATGTGTGGGTGTACCAGCCATAGATATGGTGACGCTGTTGGAAGGCTTAAGGTTTTCGTTAATGGGTACCTCGAAATCACTTGTGAATGCACCCCTGGTTGCCAAGAAGACAAGTTGACTCCCTCTGCATTTGAGAAACACTCTGGAAGAGAGACAGCCAGGAAATGGAAGAATAATGTGTGGGTAATAGTTAATGGTGAGAAGGTTCCATTGTGTAAAACAGTGCTGCTCAAATACTACAACCAAGTGTCAAAAGCTGCTAATGGGTCTCATAGATCCCAAAATGGCCGGGCTTGTCACCGTGATGAGTTTGTCCGTTGTACTAGATGCAACAAAGAGCGTAGGTTCCGTCTAAGGACTAAAGAGGAATGCCGCACTCACCATGATGCTGTGGCAGACGCAAATTGGAAATGTTCTGATCTGCCATATGACAAAATCACATGTGATGATGATGACGAACGAGCAAGTCGTAGAGTTTACAGGGGATGCACCCGCTCTCCAACATGCAAAGGTTGCACTTCTTGTGTGTGCTTTGGGTGTGATATCTGCCGTTTTTCAGATTGCAGCTGCCAGACTTGTACTGACTTTACAAGCAATGCCAAAGCTTGA 711 0.4684 MANGLERESEFTMFSEEELSEVSGVKRVGDYVEVMCGCTSHRYGDAVGRLKVFVNGYLEITCECTPGCQEDKLTPSAFEKHSGRETARKWKNNVWVIVNGEKVPLCKTVLLKYYNQVSKAANGSHRSQNGRACHRDEFVRCTRCNKERRFRLRTKEECRTHHDAVADANWKCSDLPYDKITCDDDDERASRRVYRGCTRSPTCKGCTSCVCFGCDICRFSDCSCQTCTDFTSNAKA. 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g05029 236 PANTHER PROTEIN ULTRAPETALA 1 10 235 IPR020533 -
Seca4g05029 236 ProSiteProfiles SAND domain profile. 17 105 IPR000770 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g05029 Seca-Chr4 93748637 93754863 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF ULT Seca4g05029 SAND 7.8e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g05029 - - gmx:100796203 486.108
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g05029 4 93748637 93754863 Seca4g05029 4 93748637 93754863 ECH