Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g05024 ATGCAGATGGAAAATAATGATGATGAATATGTTGTTCATTTGGACAATGATAACGATCCGAGTTTTCGTTGTAGTGTCAGCACTGATGATAGTACAAGTGAAGAGGATAATGATTTGGGTGATAATAGTGAGCCGAATAATGTAGATGCAACGGAAGAAGAATATAAAAAGATAATAGACTTGACTGCTGAAGATATATCAAGTATGGAGTTTTGTAGTGAAACTGAAGTTTGTGAGTTTTATTCTTTGTATGCAAAATTACATGGATTTGTGATGAGGAAAGATGATGTTTCACGAGATTATCATGGAAATTTGATTATGCGTCAGTTGGTGTGCAATAGGGAGGGAAGGAGAAATAAAAAACACTTCATGAGGGTAGATAGAAAAAGGGCTCACAGACCAATCACACGAACTAAATGTGAAGCTAGGTTGCGGGTACACTTTGATTATAGATCCTCAAAATGGAAAGTGGTTGCATTTGAGGAGTCTCATAATCATGAGCTTACCCCTCCCAAATACATACACTTAATTTCTACATACCGTGAGTTGAGTGATGGAGATAAGGCTCAGGCTCAAAGCTTACACTCTTATGGTGTTAGAACCTGTCATATAATGGGATTCATGTTGGCTCAAAAGGGGGGGGGGTACGATGGCCTTGGTTTTAATAAGAAGGATTTGAAAAACTACTTGGATGAGCAAAAGCGTGGTAGGATAAAAGATGGGGATGCCCATGCTGCCTTAAGCTATTTAGTAGGTAAGGCTGACAATAATCGCACTATGTTTTGTAGAGCCACAATTACAAATGATGGTAAATTGAATAACCTTTTTTGGGCTGATGCAACTAGTAGAGCTGATTTTCAGTGTTTTGGAGATGTTCTTGCATTCGATGCAACATAA 897 0.3802 MQMENNDDEYVVHLDNDNDPSFRCSVSTDDSTSEEDNDLGDNSEPNNVDATEEEYKKIIDLTAEDISSMEFCSETEVCEFYSLYAKLHGFVMRKDDVSRDYHGNLIMRQLVCNREGRRNKKHFMRVDRKRAHRPITRTKCEARLRVHFDYRSSKWKVVAFEESHNHELTPPKYIHLISTYRELSDGDKAQAQSLHSYGVRTCHIMGFMLAQKGGGYDGLGFNKKDLKNYLDEQKRGRIKDGDAHAALSYLVGKADNNRTMFCRATITNDGKLNNLFWADATSRADFQCFGDVLAFDAT. 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g05024 298 PANTHER OS01G0519700 PROTEIN 63 294 - -
Seca4g05024 298 MobiDBLite consensus disorder prediction 1 52 - -
Seca4g05024 298 Pfam FAR1 DNA-binding domain 79 169 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g05024 Seca-Chr4 93668270 93669166 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca4g05024 FAR1 3.7e-20 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g05024 - - ccaj:109792835 335.88