Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g04960 ATGGCGTCTGGATCGTCCGGTCGCGGTAACTCCGGCTCGAAAGGCTTCGATTTCGGTTCCGATGATATCTTGTGCTCCTACGAAGACTATTCCAACAGGGATTCAAATTCCAATGGCAATCACACCGATCCGGTCATCGCCCCCAATTCAACTAAGGATTATCACAAATCAAGGGTGGCAAGGACATCAATGTTTCCCACTACTGCCTATAATCCACCTGAAGATTCTTTTAGCCAAGATGTGATTGCAACTGTAGAGAAAAGTATGAAAAAGTATGCTGACAACCTCATGCGGTTTCTTGAGGGAATTAGTTCAAGGCTATCACAGTTGGAATTATATTGCTACAATCTTGACAAATCTATTGGAGAAATGAGATCTGATTTAAATCGTGACCATGGGGAGCAAGATTCAAAGCTCAAATCTCTTGAAAAGCACCTTCAAGAAGTTCACAGGTCTGTACAAATTTTAAGAGACAAGCAAGAGCTAGCTGACACTCAGAAAGAATTAGCCAAGCTTCAACTTGCTCAAAAAGAATCATCTTCCTCAAGCCATTCACATTCCAATGAGGACAGATCATCTACTACCACAGATCCCAAAAAAACTGATAATGCATCTGATGCACACAACCAGCAGTTAGCTCTTGCCCTTCCTCATCAAATTGCCCCTCAGCCGCAGCCTGCACCACCCCCAACCCAAGCTCCTGCACCGAATGTGACTCAATCCCCTCAACAACCTGCTTATTACATGCCGCCCGCCCCTTTGCCTAATCCACCAGCCATGGCCCAGGTCCCTCAGAATCAGTATTTACCTTCTGATCAACAATATCGAACACCCCAACTACAGGACATGTCCCGGGTAGCTCCACAACCAGCACCTTCTCAAGTGACCCCTCCCCCACCTGTGCAGCAATATTCTCAGTATCAGCAGCCCCAGCCCCAGCCCCAGCCCCAGCCCCAGCCCCAGCAACAGCAGCAGCAACCGCAGCAATGGCCCCAGCAGGTACAACCTCCACAACCACCCTCATTGCAAGGTCAAATAAGACCCCCTTCCTCAACTGTGTATCCTCCATACCAGCCAAATCAAGCAACAAATTCATCACCCACAGAAACACTGCCAAACAGCATGCCAATGCAAATGCCATACTCAGGGGTTCCGGTTCCACCACCAGGATCTAGCCGTGCTGATACCATACCATATGGATATGGAGGAAGTGGTGGTAGACCAGTTCCTCAGCAACCTCCACCCCAGCAAATCAAGAGCTCTTTCCCTGCTCAACCAGGTGACGTATATGGAACTAGTGGGACACACCCTGCACTTCCTCCTCCTGGCAATGCATACATGATGTATGATAGTGAGGGAGGAAGAACACATCATACACCCCAGCAACCTCCTCATTTTGCTCAAGCTGGATATCCTCCAACAAGTGCTTCTCTTCAGAACCCAACAGGTCACAATCTTATGGTCCGAAATCCTAGCCAGTCACAATTTGTACGCAACCATCCCTACAGTGAGTTGATTGAGAAATTGGTGAGCATGGGATTCAGGGGTGACCATGTGGCAAGTGTGATCCAAAGGATGGAAGATAGTGGACAGCCTATAGATTTCAATTCTGTACTTGACAGGTTGAATGTGCATAGCTCTGTGGGTCCCCAGAGAGGATGGTCAGGGTGA 1671 0.4823 MASGSSGRGNSGSKGFDFGSDDILCSYEDYSNRDSNSNGNHTDPVIAPNSTKDYHKSRVARTSMFPTTAYNPPEDSFSQDVIATVEKSMKKYADNLMRFLEGISSRLSQLELYCYNLDKSIGEMRSDLNRDHGEQDSKLKSLEKHLQEVHRSVQILRDKQELADTQKELAKLQLAQKESSSSSHSHSNEDRSSTTTDPKKTDNASDAHNQQLALALPHQIAPQPQPAPPPTQAPAPNVTQSPQQPAYYMPPAPLPNPPAMAQVPQNQYLPSDQQYRTPQLQDMSRVAPQPAPSQVTPPPPVQQYSQYQQPQPQPQPQPQPQQQQQQPQQWPQQVQPPQPPSLQGQIRPPSSTVYPPYQPNQATNSSPTETLPNSMPMQMPYSGVPVPPPGSSRADTIPYGYGGSGGRPVPQQPPPQQIKSSFPAQPGDVYGTSGTHPALPPPGNAYMMYDSEGGRTHHTPQQPPHFAQAGYPPTSASLQNPTGHNLMVRNPSQSQFVRNHPYSELIEKLVSMGFRGDHVASVIQRMEDSGQPIDFNSVLDRLNVHSSVGPQRGWSG. 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g04960 556 MobiDBLite consensus disorder prediction 190 204 - -
Seca4g04960 556 Coils Coil 139 175 - -
Seca4g04960 556 Pfam UBA-like domain (DUF1421) 502 546 IPR010820 -
Seca4g04960 556 PANTHER RECEPTOR-LIKE KINASE, PUTATIVE (DUF1421)-RELATED 3 556 - -
Seca4g04960 556 MobiDBLite consensus disorder prediction 246 260 - -
Seca4g04960 556 MobiDBLite consensus disorder prediction 345 377 - -
Seca4g04960 556 MobiDBLite consensus disorder prediction 29 47 - -
Seca4g04960 556 MobiDBLite consensus disorder prediction 173 189 - -
Seca4g04960 556 MobiDBLite consensus disorder prediction 291 321 - -
Seca4g04960 556 MobiDBLite consensus disorder prediction 261 290 - -
Seca4g04960 556 MobiDBLite consensus disorder prediction 220 396 - -
Seca4g04960 556 MobiDBLite consensus disorder prediction 221 236 - -
Seca4g04960 556 MobiDBLite consensus disorder prediction 29 53 - -
Seca4g04960 556 MobiDBLite consensus disorder prediction 173 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g04960 Seca-Chr4 92502617 92509049 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g04960 84 183 Trihelix Transcription Factor Family AT3G01560 36.000 6.16e-18 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g04960 - - adu:107478128 682.559
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g04960 4 92502617 92509049 Seca4g04960 4 92502617 92509049 ECH