Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca4g04944 | ATGGCACAAAGGGAGCTCAAACGCCTCCGTTTCTCACACGCAGGGTTTCACGCAGATTTGACAGGTAGAGTTTCTTTTTCTCCGCTGACCCAATGGCTCCACCTAAAGGTTATAGGAAAATTGAGCGAGGGGAAGGCATCTCATGTTCCATATCGAGATTCAAAGCTAACCCGCCTCCTGCAATCTTCTCTCAGTGGGCATGGCCATGTTTCACTTATATGCACAGTAACTCCAGCATCCAGTAATTTGGAGGAAACTCATAATACCTTGAAGTTTGCCAGCAGGGCAAAACGAGTAGAAATATATGCGTCACGTAATAAGATTATTGATGAAAAATCTCTAATTAAGAAATATCAGAGAGAAATTTCAGCTCTTAAATTAGAACTTGATCAACTAAAGAAGGGGATGGTAGTTGGCATCAATCATGAGGATATTATGACCTTAAAGCAGAAGAAATTGGATGTGTTGCGTGATGGTGTGTTGAATGAAAATGAGAGTCAAAAAGATGCTGCTGCAGTGTCATCACATATGTTTCATGATGTTAGACATAAAAGATCGTCAAGTAGATGGAATGAAGAGTTCTCCCCGACTAGCAGTACTGTTACCGAATCAACACAAGCTGGTTATGAGTTGGCACTGGATATGACTTACAGGGACCTTCAAGCTGCTACAAAGAGGGATGGAGCTGCTTCCACATCAGAAAAGACATTTGATGCAAAGACACTAAGACGTTTCACTCAAAACAGGGAGGCTGCAACAAAAAGCCGTCTCACAAAAAAGGCTCATGTGCAACAATTAGAATCAAGTAGATTAAAGCTCACCCACCTTGGGCAAGACCTTTTTAATTAA | 849 | 0.4158 | MAQRELKRLRFSHAGFHADLTGRVSFSPLTQWLHLKVIGKLSEGKASHVPYRDSKLTRLLQSSLSGHGHVSLICTVTPASSNLEETHNTLKFASRAKRVEIYASRNKIIDEKSLIKKYQREISALKLELDQLKKGMVVGINHEDIMTLKQKKLDVLRDGVLNENESQKDAAAVSSHMFHDVRHKRSSSRWNEEFSPTSSTVTESTQAGYELALDMTYRDLQAATKRDGAASTSEKTFDAKTLRRFTQNREAATKSRLTKKAHVQQLESSRLKLTHLGQDLFN. | 283 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca4g04944 | 282 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 36 | 134 | IPR027417 | - | |
Seca4g04944 | 282 | Pfam | Kinesin motor domain | 36 | 99 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Seca4g04944 | 282 | Coils | Coil | 108 | 135 | - | - | |
Seca4g04944 | 282 | FunFam | BZIP family transcription factor | 239 | 282 | - | - | |
Seca4g04944 | 282 | PANTHER | CENTROMERE PROTEIN E | 36 | 229 | IPR027640 | GO:0003777|GO:0007018 | |
Seca4g04944 | 282 | Gene3D | Kinesin motor domain | 31 | 130 | IPR036961 | - | |
Seca4g04944 | 282 | SMART | kinesin_4 | 2 | 107 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Seca4g04944 | 282 | Pfam | bZIP transcription factor | 239 | 274 | IPR004827 | GO:0003700|GO:0006355 | |
Seca4g04944 | 282 | ProSiteProfiles | Kinesin motor domain profile. | 1 | 99 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Seca4g04944 | 282 | Gene3D | - | 239 | 280 | - | - | |
Seca4g04944 | 282 | SUPERFAMILY | Leucine zipper domain | 240 | 279 | IPR046347 | GO:0003700|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca4g04944 | Seca-Chr4 | 91833030 | 91838495 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca4g04944 | 37 | 151 | Miscellaneous Gene Families | AT4G39050 | 84.348 | 1.27e-62 | 211 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | bZIP | Seca4g04944 | Kinesin | 1.1e-22 | CL0023 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca4g04944 | K11498 | - | gmx:100812720 | 260.766 |