Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g04944 ATGGCACAAAGGGAGCTCAAACGCCTCCGTTTCTCACACGCAGGGTTTCACGCAGATTTGACAGGTAGAGTTTCTTTTTCTCCGCTGACCCAATGGCTCCACCTAAAGGTTATAGGAAAATTGAGCGAGGGGAAGGCATCTCATGTTCCATATCGAGATTCAAAGCTAACCCGCCTCCTGCAATCTTCTCTCAGTGGGCATGGCCATGTTTCACTTATATGCACAGTAACTCCAGCATCCAGTAATTTGGAGGAAACTCATAATACCTTGAAGTTTGCCAGCAGGGCAAAACGAGTAGAAATATATGCGTCACGTAATAAGATTATTGATGAAAAATCTCTAATTAAGAAATATCAGAGAGAAATTTCAGCTCTTAAATTAGAACTTGATCAACTAAAGAAGGGGATGGTAGTTGGCATCAATCATGAGGATATTATGACCTTAAAGCAGAAGAAATTGGATGTGTTGCGTGATGGTGTGTTGAATGAAAATGAGAGTCAAAAAGATGCTGCTGCAGTGTCATCACATATGTTTCATGATGTTAGACATAAAAGATCGTCAAGTAGATGGAATGAAGAGTTCTCCCCGACTAGCAGTACTGTTACCGAATCAACACAAGCTGGTTATGAGTTGGCACTGGATATGACTTACAGGGACCTTCAAGCTGCTACAAAGAGGGATGGAGCTGCTTCCACATCAGAAAAGACATTTGATGCAAAGACACTAAGACGTTTCACTCAAAACAGGGAGGCTGCAACAAAAAGCCGTCTCACAAAAAAGGCTCATGTGCAACAATTAGAATCAAGTAGATTAAAGCTCACCCACCTTGGGCAAGACCTTTTTAATTAA 849 0.4158 MAQRELKRLRFSHAGFHADLTGRVSFSPLTQWLHLKVIGKLSEGKASHVPYRDSKLTRLLQSSLSGHGHVSLICTVTPASSNLEETHNTLKFASRAKRVEIYASRNKIIDEKSLIKKYQREISALKLELDQLKKGMVVGINHEDIMTLKQKKLDVLRDGVLNENESQKDAAAVSSHMFHDVRHKRSSSRWNEEFSPTSSTVTESTQAGYELALDMTYRDLQAATKRDGAASTSEKTFDAKTLRRFTQNREAATKSRLTKKAHVQQLESSRLKLTHLGQDLFN. 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g04944 282 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 36 134 IPR027417 -
Seca4g04944 282 Pfam Kinesin motor domain 36 99 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca4g04944 282 Coils Coil 108 135 - -
Seca4g04944 282 FunFam BZIP family transcription factor 239 282 - -
Seca4g04944 282 PANTHER CENTROMERE PROTEIN E 36 229 IPR027640 GO:0003777|GO:0007018
Seca4g04944 282 Gene3D Kinesin motor domain 31 130 IPR036961 -
Seca4g04944 282 SMART kinesin_4 2 107 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca4g04944 282 Pfam bZIP transcription factor 239 274 IPR004827 GO:0003700|GO:0006355
Seca4g04944 282 ProSiteProfiles Kinesin motor domain profile. 1 99 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca4g04944 282 Gene3D - 239 280 - -
Seca4g04944 282 SUPERFAMILY Leucine zipper domain 240 279 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g04944 Seca-Chr4 91833030 91838495 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g04944 37 151 Miscellaneous Gene Families AT4G39050 84.348 1.27e-62 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Seca4g04944 Kinesin 1.1e-22 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g04944 K11498 - gmx:100812720 260.766