Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g04932 ATGGCAGGGCCTGGACAAGTATCTCACAGGCTTCTCGGCCTTTTGCTTTTGATGTTGCTAATTCTTATAAGCTCATCTCAAGCAAAGAAACTTGAAGTTGGTGGCAAGGATGGGTGGGTGGAGAAACCTTCCGAAGACTACAATCACTGGGCAAAAAGAAACAGATTTCAAGTCAATGACACTCTCAATTTTAAGTACCAGAAAGGGGCTGATTCGGTTCAGGTGGTGACGAAGGAGGATTTTGATTCGTGCAACACCAAAAAGCCAATAATAATGTTGATCGATGGGGATTCTGATGTTCTACTTTACCAGTCTGGTCTCTTTTACTTCATCAGTGGTAACGTTGACCACTGCAGAAATGGTCAAAAGCTTGTTGTTCTGGTTATGTCTGTTAAACAACATCACCCTGTTCCTGCTGCACCACCGTCTGAGCCACCGGCCACCGACTTGCAGCCAGCTGCTCCGAAAATTCGCTCTATAAATACTCCGGCGCCGTCTCCTTCAGGCTCATCAAGGCTTGGTGTGGGTTTCGGTTTGGGTTTGGTTGTTGGGGTTGTTATGCTCACAGGCTTTGCAGGGCTTGTTTAG 588 0.466 MAGPGQVSHRLLGLLLLMLLILISSSQAKKLEVGGKDGWVEKPSEDYNHWAKRNRFQVNDTLNFKYQKGADSVQVVTKEDFDSCNTKKPIIMLIDGDSDVLLYQSGLFYFISGNVDHCRNGQKLVVLVMSVKQHHPVPAAPPSEPPATDLQPAAPKIRSINTPAPSPSGSSRLGVGFGLGLVVGVVMLTGFAGLV. 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g04932 195 CDD OsENODL1_like 29 129 IPR041846 -
Seca4g04932 195 PANTHER BLUE COPPER PROTEIN 30 138 IPR039391 GO:0009055
Seca4g04932 195 FunFam Early nodulin-like protein 1 28 133 - -
Seca4g04932 195 Pfam Plastocyanin-like domain 39 122 IPR003245 GO:0009055
Seca4g04932 195 SUPERFAMILY Cupredoxins 28 129 IPR008972 -
Seca4g04932 195 ProSiteProfiles Phytocyanin domain profile. 29 130 IPR003245 GO:0009055
Seca4g04932 195 Gene3D - 27 133 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g04932 Seca-Chr4 91568279 91569215 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g04932 12 189 Phytocyanin Superfamily AT4G28365 45.263 4.23e-48 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g04932 - - gmx:100778867 184.111
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g04932 4 91568279 91569215 Seca4g04932 4 91568279 91569215 ECH