Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g04922 ATGGCTGATGGACCTCAGTATCCATCAGTTGTTCAGAAGTTAGCTGGACAGTCTTATCTGGTGTCCAGGCTTAGCTCCAACTATCACTCAAGGAACTATTCTACATCCGGTGCTTACATCAATGGAGGAGTGCAGTCTTCTGGTCTGTCAATTGTGTCACCTGTATCTTCAATTACTGTGCCTGCTCCAGCAGAGAAAGGAGCAGGTGCATTTATGGTGGATTTTCTGATGGGAGGAGTGTCTGCTGCTGTATCAAAGACAGCTGCTGCTCCAATTGAACGAGTCAAATTACTTATACAAAATCAGGATGAAATGATCAAAAGTGGCCGGTTATCTGAGCCATATAAGGGAATTAGTGATTGTTTTGCTCGAACCATGAAGGATGAGGGTGTAATTGCTCTCTGGAGAGGCAATACTGCTAATGTTATTAGATACTTCCCTACTCAGGCTCTGAACTTTGCTTTTAAGGATTACTTCAAGAGGCTTTTCAACTTTAAAAAAGACAAAGATGGCTACTGGAAGTGGTTTGCTGGGAATTTGGCATCTGGTGGGGCTGCTGGGGCATCCTCCCTCTTATTTGTCTACTCCTTGGATTATGCCCGTACCCGTTTGGCAAATGATGCAAAGGCTGCAAAGAAGGGTGGTGAGAGGCAGTTTAATGGCCTGGTTGATGTTTATAAGAAAACCATTCAGTCTGATGGCGTTGCTGGCCTTTATCGTGGATTCAACATCTCATGTGTTGGAATCATAGTGTATCGTGGTCTTTACTTTGGAATGTATGATTCTCTGAAACCAGTTGTTTTGGTTGGTGGGTTGCAGGATAGTTTCTTTGCTAGTTTCTTTCTGGGATGGGCAATCACGATTGGTGCTGGTTTGGCTTCTTATCCCATTGATACTGTGCGTAGAAGGATGATGATGACTTCTGGAGAAGCTGTGAAGTACAAGAGCTCTTTGCATGCATTCCAAACAATCGTCGCAAATGAGGGTGCTAAGTCACTCTTCAAAGGTGCTGGTGCAAACATATTACGTGCTGTTGCTGGTGCTGGTGTGCTTGCTGGTTATGACAAGCTCCAGCTCATTTTGTTTGGAAAGAAATATGGTTCTGGCGGCGGCTAA 1116 0.4435 MADGPQYPSVVQKLAGQSYLVSRLSSNYHSRNYSTSGAYINGGVQSSGLSIVSPVSSITVPAPAEKGAGAFMVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGISDCFARTMKDEGVIALWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDKDGYWKWFAGNLASGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGERQFNGLVDVYKKTIQSDGVAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVVLVGGLQDSFFASFFLGWAITIGAGLASYPIDTVRRRMMMTSGEAVKYKSSLHAFQTIVANEGAKSLFKGAGANILRAVAGAGVLAGYDKLQLILFGKKYGSGGG. 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g04922 371 Gene3D Mitochondrial carrier domain 72 367 IPR023395 -
Seca4g04922 371 PRINTS Mitochondrial carrier protein signature 189 207 IPR002067 GO:0055085
Seca4g04922 371 PRINTS Mitochondrial carrier protein signature 137 157 IPR002067 GO:0055085
Seca4g04922 371 PRINTS Mitochondrial carrier protein signature 239 257 IPR002067 GO:0055085
Seca4g04922 371 PRINTS Mitochondrial carrier protein signature 283 305 IPR002067 GO:0055085
Seca4g04922 371 PRINTS Mitochondrial carrier protein signature 74 87 IPR002067 GO:0055085
Seca4g04922 371 PRINTS Mitochondrial carrier protein signature 87 101 IPR002067 GO:0055085
Seca4g04922 371 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 64 370 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Seca4g04922 371 ProSiteProfiles Solute carrier (Solcar) repeat profile. 69 162 IPR018108 -
Seca4g04922 371 Pfam Mitochondrial carrier protein 71 166 IPR018108 -
Seca4g04922 371 Pfam Mitochondrial carrier protein 173 266 IPR018108 -
Seca4g04922 371 Pfam Mitochondrial carrier protein 275 362 IPR018108 -
Seca4g04922 371 ProSiteProfiles Solute carrier (Solcar) repeat profile. 174 266 IPR018108 -
Seca4g04922 371 SUPERFAMILY Mitochondrial carrier 71 356 IPR023395 -
Seca4g04922 371 ProSiteProfiles Solute carrier (Solcar) repeat profile. 274 360 IPR018108 -
Seca4g04922 371 PRINTS Adenine nucleotide translocator signature 71 83 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Seca4g04922 371 PRINTS Adenine nucleotide translocator signature 279 295 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Seca4g04922 371 PRINTS Adenine nucleotide translocator signature 115 136 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Seca4g04922 371 PRINTS Adenine nucleotide translocator signature 148 160 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Seca4g04922 371 PRINTS Adenine nucleotide translocator signature 174 187 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Seca4g04922 371 FunFam ADP,ATP carrier protein, mitochondrial 72 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g04922 Seca-Chr4 91331582 91334418 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g04922 3 362 Antiporters AT4G28390 81.843 0.0 585
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g04922 K05863 - gmx:100818408 665.611
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g04922 4 91331582 91334418 Seca4g04922 4 91331582 91334418 ECH