Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g04915 ATGACTGGCAGAGAAATCCTCAACAAGATGAAGGTGAAAGCAGGGTTTGGAACATCAGCACCAGACACTACTGGGAAGGGAAAAAGCAAAATATCAAAACATATCACACATGGCTTTCACTTGGTGAAGGGAAAATCAAGTCATCCTATGGAAGATTATTTAGTTTCAGAATTTAAGAAAGAAAAGGAAAAAGAATTAGGTTTGTTTGCTATATTTGATGGCCACTTAGGCCATGATGTTGCAAGCTATTTGCAGAACCACCTTTTTCAAAATATCTTAAAACAGCATGACTTCTGGACTGAAACAGAAAATGCAGTAAAGAGAGCTTATCTTGAAACAGATGAGAAAATACTAGAACAAGCACTTGTTTTGGGACGAGGAGGATCAACAGCAGTAACTGCAATTTTGATTGAAGGTCAGAAACTTGTAGTAGCAAATGTTGGTGACTCTCGAGCTGTTATTTGTGAGAATGGAAAGGCCAGGCAACTATCAGTTGATCATGAACCAAGCAGAGAAAAAAAATCTATTGAAAGCCGTGGTGGCTTTGTATCAAATATTCCAGGTAGCCAACCAGCTTTTTCAGGAAACAAAAAAAAAAAAGAATTTTCAACATGTGCAAGGGTGAATACTTGGATTCTATCATAA 645 0.3736 MTGREILNKMKVKAGFGTSAPDTTGKGKSKISKHITHGFHLVKGKSSHPMEDYLVSEFKKEKEKELGLFAIFDGHLGHDVASYLQNHLFQNILKQHDFWTETENAVKRAYLETDEKILEQALVLGRGGSTAVTAILIEGQKLVVANVGDSRAVICENGKARQLSVDHEPSREKKSIESRGGFVSNIPGSQPAFSGNKKKKEFSTCARVNTWILS. 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g04915 214 PANTHER PROTEIN PHOSPHATASE 30 202 IPR015655 GO:0004722|GO:0006470
Seca4g04915 214 ProSiteProfiles PPM-type phosphatase domain profile. 36 214 IPR001932 -
Seca4g04915 214 SMART PP2C_4 26 208 IPR001932 -
Seca4g04915 214 Pfam Protein phosphatase 2C 46 185 IPR001932 -
Seca4g04915 214 Gene3D - 13 210 IPR036457 -
Seca4g04915 214 CDD PP2Cc 43 185 IPR001932 -
Seca4g04915 214 SUPERFAMILY PP2C-like 29 185 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g04915 Seca-Chr4 91223623 91226730 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g04915 1 195 PP2C-type Phosphatase Gene Family AT2G20630 67.179 3.30e-91 268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g04915 K17506 - gmx:100819846 327.02