Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g04863 ATGGCACAATTGCCACCCAAGATTCCAAACATGACACCAACTTGGCCTGAGTTTTCCTCTCACCAAAAAATTATGCCTTCCCTTAAAAGCATTTCACCAAATGCAGTAACCAACACAAGCACAAACCTTTTGAACAACCATCATCAAAACCCTTCATGGGTCGACGAGTTTCTCGACTTCTCATCGGCGAGACGTGGTGCTCACCGCCGGTCAGTGAGCGACTCCATCACTTTCATGGAGGCACCATCAATGCTGGATGGAAAGGGTAGTGGTGATGATGGTGGTGGTCACAATGAGTTCGAAAGATTCGATGATGAACAATTCATGTCCATGTTCAATGACGAGGTTTCAGGGAACAACAACCCCATGATGCAACCACCCACGTTGTCTTCTTCCAACCCTTCCACACCCTCTGATCATAACAGCATCAATGATGAGAAAGAAACAAACAGAGAAAAAGAAGAAGAGGAGGAAAAACAAGAGGATCAGCAGCAACAACATCAGAAGCAATTGAAGCTTGAATCAGATGAGGATGAACAGGAAACTACACGAGCTCACAATGATGATAGCAATAAGAATAATGATAATAATGCAAATGCAACAACTTGTTCCAATGACAGAATCACAGACCCCAAGAGAGTCAAAAGAATCTTGGCAAATAGGCAATCTGCACAGAGATCAAGAGTGAGGAAGCTGCAATACATATCAGAGCTTGAGAGAAGTGTGACTTCATTACAAGCTGAAGTTTCAGTACTGTCTCCAAGGGTTGCATTTTTGGATCATCAGCGGTTGCTTCTAAATGTTGATAACAGTGCTCTCAAGCAAAGAATCGCCGCCCTGGCTCAAGACAAGATTTTCAAAGATGGTACTTGCTTTAAGTATTATCTTTTACTAAACTATGCAGCTCATCAAGAGGCATTGAAGAGGGAGATAGAGAGGCTGAGGCAAGTGTATCACCAACAAAGCATCAAGAAGAAGATGGACAGTGCTGCAGGGTCACCATCCCCATCACCAAAACCACGATGTGATACTCAGACTGAAAAGGAACATCTTATCAACGTTTAA 1065 0.4319 MAQLPPKIPNMTPTWPEFSSHQKIMPSLKSISPNAVTNTSTNLLNNHHQNPSWVDEFLDFSSARRGAHRRSVSDSITFMEAPSMLDGKGSGDDGGGHNEFERFDDEQFMSMFNDEVSGNNNPMMQPPTLSSSNPSTPSDHNSINDEKETNREKEEEEEKQEDQQQQHQKQLKLESDEDEQETTRAHNDDSNKNNDNNANATTCSNDRITDPKRVKRILANRQSAQRSRVRKLQYISELERSVTSLQAEVSVLSPRVAFLDHQRLLLNVDNSALKQRIAALAQDKIFKDGTCFKYYLLLNYAAHQEALKREIERLRQVYHQQSIKKKMDSAAGSPSPSPKPRCDTQTEKEHLINV. 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g04863 354 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 215 230 IPR004827 GO:0003700|GO:0006355
Seca4g04863 354 MobiDBLite consensus disorder prediction 141 191 - -
Seca4g04863 354 Coils Coil 297 324 - -
Seca4g04863 354 MobiDBLite consensus disorder prediction 192 207 - -
Seca4g04863 354 Coils Coil 143 177 - -
Seca4g04863 354 CDD bZIP_plant_RF2 213 263 IPR044759 GO:0003700|GO:0006355
Seca4g04863 354 SUPERFAMILY Leucine zipper domain 212 266 IPR046347 GO:0003700|GO:0006355
Seca4g04863 354 MobiDBLite consensus disorder prediction 113 208 - -
Seca4g04863 354 MobiDBLite consensus disorder prediction 80 100 - -
Seca4g04863 354 SMART brlzneu 208 272 IPR004827 GO:0003700|GO:0006355
Seca4g04863 354 MobiDBLite consensus disorder prediction 113 140 - -
Seca4g04863 354 Gene3D - 211 283 - -
Seca4g04863 354 FunFam Basic leucine zipper 61 211 284 - -
Seca4g04863 354 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 210 262 IPR004827 GO:0003700|GO:0006355
Seca4g04863 354 PANTHER BASIC LEUCINE ZIPPER 34 1 338 - -
Seca4g04863 354 MobiDBLite consensus disorder prediction 324 354 - -
Seca4g04863 354 Pfam bZIP transcription factor 212 256 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g04863 Seca-Chr4 90411507 90413777 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g04863 1 289 bZIP Transcription Factor Family AT3G58120 55.814 7.68e-97 287
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Seca4g04863 bZIP_2 4.3e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g04863 - - lang:109363232 419.083