Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g04860 ATGGAGTCGCATTGCTTCCTATGTTTACACGCCGCATATTTTCTCCTCCTCGCTTCAACCGTATGCTGCCTTTCACACCCTTCTCTCCTTGGCGTCCACCCTCTAGATGAAAAATATTACAGCTCCGAGGTGATCAAGTGCAGGGATGGATCAAAATCCTTCTCCAGAAATCGTCTCAATGACAATTTCTGTGACTGCTCTGATGGCACTGATGAACCTGGAACTTCAGCTTGCCCAGCAGCAAAGTTTTATTGCAGAAACCTAGGAAGCAAGCCACTGTTTATAGTCTCTTCTCATGTTAATGATAATTTTTGTGATTGTTGTGATGGGAGTGATGAATATGATGGAAACATTCGTTGCCCCAACACATGCGTCATGGGTGGCAATACTGAGTACATGATTGTCAATTACAACACAAAAGTAAATGATTTTCCTGAAAAAGAAAGCAAAAATGGAATGAAGTCAGAGGAAACAGTTCGTAATCTTACCGGTTTGAAATTGGCAATTATTCTGCAAGTGGTTCTGGTTATTTTTGTGGTATTTCTCTGGAGTTTTCGTTGCCACACCAGATCTAGAAGGAGGCGTTACCGTTGA 594 0.4209 MESHCFLCLHAAYFLLLASTVCCLSHPSLLGVHPLDEKYYSSEVIKCRDGSKSFSRNRLNDNFCDCSDGTDEPGTSACPAAKFYCRNLGSKPLFIVSSHVNDNFCDCCDGSDEYDGNIRCPNTCVMGGNTEYMIVNYNTKVNDFPEKESKNGMKSEETVRNLTGLKLAIILQVVLVIFVVFLWSFRCHTRSRRRRYR. 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g04860 197 PANTHER N-LINKED OLIGOSACCHARIDE PROCESSING 14 159 IPR039794 -
Seca4g04860 197 Pfam Glucosidase II beta subunit-like 21 127 IPR028146 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g04860 Seca-Chr4 90394371 90396067 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g04860 29 138 Calmodulin-binding Proteins AT5G56360 62.069 5.63e-46 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g04860 - - tpra:123907740 281.952