Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g04845 ATAAATCAATATATTAGTTTGTATGCTCGCACTGGTGTTCTTCCTAGCAAAGTTTTTCAAGGAAAGGCAGCAGAGGAGTGGGGTCAAGTTGATAGCTTAAGATATGATTGCTGTTTTATATGTGTGGATGCATCTCTCCCTGTACTGGACAAATATGTAGATCATAGAGTGGATTGCATGATGGATGCTGGACTACTCAATGAAGTCTATGACATTTATAATCTTCATGCAGATTATTCTAGAGGTTTGCGGCAGGCCATTGGTGTCCGTGAATTTGAGCTTCTTCTTAGAACTTTTGTTGTCGAAGACATCTCTAAAAGAGAGAAGGAATTAACAGAGGGATCCAGCATTGAGAAGCATGAGACGTTGTTCAATGGTAATCTGATGGAGTGGTTGAGGTCTTCCTCTGATTCTAAATCCATAATTCTTTTGGAAGAAGCAATAGAAAAAGTAAAACTTAATACCCGAAGACTTGTTCGCCGTCAGATATGCAAGGAAACTGGAAGTTAG 510 0.3922 INQYISLYARTGVLPSKVFQGKAAEEWGQVDSLRYDCCFICVDASLPVLDKYVDHRVDCMMDAGLLNEVYDIYNLHADYSRGLRQAIGVREFELLLRTFVVEDISKREKELTEGSSIEKHETLFNGNLMEWLRSSSDSKSIILLEEAIEKVKLNTRRLVRRQICKETGS. 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g04845 169 Pfam IPP transferase 5 163 - -
Seca4g04845 169 Gene3D - 30 45 IPR027417 -
Seca4g04845 169 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 46 165 - -
Seca4g04845 169 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 22 164 IPR039657 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g04845 Seca-Chr4 90169617 90170484 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g04845 1 155 C2H2 Transcription Factor Family AT2G27760 52.903 4.36e-48 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g04845 K00791 - gmx:100792690 265.388