Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g04797 ATGGTGGATGCAATGAAGAAACTTGCAAATCTTGATGTTGAACTGACCATTGAAGAGCGAAATTTACTTTCTGTTGGTTATAAGAATGTGGTTGGTGCTCGCAGAGCATCATGGAGGATCTTGTCTTCCATAGAGCAAAAGGAAGAAACAAAAGGAAATGAAGTAAATGTAAAACGGATTAGGGAATATAGGAAAAAGGTTGAATTGGAGCTTTCAAACATCTGTAATGATGTTATGAGAGTGATTGATGAACATCTTATACCTTCAGCTGCAGCTGGTGAATCAACCGTGTTTTATTATAAGATGAAAGGAGATTATTATAGATATCTTGCAGAATTTAAGCCAGGGAATGAGAAGAAGGAGGCTGCTGATCAGTCAATGAAAGCATATGAGTCTGCTACCACAACAGCAGAGGCCGAATTACCTCCCACTCATCCCATCCGATTGGGTCTGGCTTTAAATTTCTCCGTTTTCTATTATGAGATCATGAATTCACCAGAGAGGGCCTGTCACTTTGCAAAGCAAGCTTTTGATGAAGCTATTTCTGAGCTTGACACCTTGAGTGAAGAGTCATACAAAGATAGCACCTTGATCATGCAACTTCTCAGGGACAACCTTACATTGTGGACTTCTGACATCCCAGAAGATGGAGAGGATTCCCTGAAAGTGAATGGCAGCGTCAAGGTTGGCGGACATGAGGATGCAGAGGTAAGTAATTCTTTAATAAACTTTGCTATATCATTATAA 747 0.4003 MVDAMKKLANLDVELTIEERNLLSVGYKNVVGARRASWRILSSIEQKEETKGNEVNVKRIREYRKKVELELSNICNDVMRVIDEHLIPSAAAGESTVFYYKMKGDYYRYLAEFKPGNEKKEAADQSMKAYESATTTAEAELPPTHPIRLGLALNFSVFYYEIMNSPERACHFAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGEDSLKVNGSVKVGGHEDAEVSNSLINFAISL. 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g04797 248 PRINTS 14-3-3 protein zeta signature 129 155 IPR000308 -
Seca4g04797 248 PRINTS 14-3-3 protein zeta signature 156 182 IPR000308 -
Seca4g04797 248 PRINTS 14-3-3 protein zeta signature 94 116 IPR000308 -
Seca4g04797 248 PRINTS 14-3-3 protein zeta signature 14 43 IPR000308 -
Seca4g04797 248 PRINTS 14-3-3 protein zeta signature 63 87 IPR000308 -
Seca4g04797 248 PRINTS 14-3-3 protein zeta signature 183 212 IPR000308 -
Seca4g04797 248 PIRSF 14-3-3 1 222 IPR000308 -
Seca4g04797 248 SMART 1433_4 1 223 IPR023410 -
Seca4g04797 248 PANTHER 14-3-3 PROTEIN 1 213 IPR000308 -
Seca4g04797 248 Gene3D - 1 224 IPR036815 -
Seca4g04797 248 ProSitePatterns 14-3-3 proteins signature 1. 20 30 IPR023409 -
Seca4g04797 248 FunFam 14-3-3 protein epsilon 1 223 - -
Seca4g04797 248 ProSitePatterns 14-3-3 proteins signature 2. 192 211 IPR023409 -
Seca4g04797 248 Pfam 14-3-3 protein 1 210 IPR023410 -
Seca4g04797 248 SUPERFAMILY 14-3-3 protein 2 219 IPR036815 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g04797 Seca-Chr4 89365010 89367579 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g04797 1 238 14-3-3 family AT2G42590 80.833 1.46e-143 401
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g04797 K06630 - gmx:547990 430.639