Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g04760 ATGGCTCACCTTAACCACTTCTTTGTTATAGTATCTATCCTTTCTCTGCTTGCCTATTGTAACAATGCACAACTTTCTCCCAACTTTTATGACACAACTTGTCCTAACCTTCAAACCATAGTACGCAATGCAATGGGACAAGCTATTAATAGAGAAGCCCGGCTTGGCGCTTCTATACTTCGCTTGTTCTTTCATGATTGCTTTGTCAATGGCTGCGATGTATCAATCTTACTAGACGACACTACCACCTTCACCGGTGAAAAAAATGCAGCACCTAACCGAAATTCAGCTAGGGGTTTCGAAGTTATTGACACCATTAAAACCAATGTTGAAGCTGCTTGCTCTGCCACCGTCTCTTGTGCAGATATCTTAGCACTTGCCGCAAGAGATGGTGTTGTTCTGCCAGAGTGCAGCCAACAACCAAATCCTTCACCATTCTCTGACCTATCAACCCTAACCTCTATGTTTGCTGCCAAAGGACTAAGTGCAAGTGACTTGACAGTGCTCTCAGGTGGCCACACCATAGGCCAAGCTCAGTGCCAATTTTTCAAGACTCACATATACAATGAGACCAACATTGATGCAAACTTTGCCACCACTATAAGGGCTAATTGCCCTGCCTCTGGTGGGGACACCAACTTGGCCCCTCTTGATACCCTCACCCCAACTTGTTTTGACAACAGCTACTACACTGACCTTGTGGCTCAACGTGGCCTTCTCCACTCAGACCAAGTGCTTTTCAATGGTGGGTCTCAAGATGCTTTGGTTAGGACTTATAGTACCAATAATGCTGCTTTTTTCAGTGACTTTGCTGCTGCTATGGTAAGAATGGGCAATATTAGTCCTCTCACTGGGACCAATGGGGAAATCAGAAGAAATTGA 882 0.449 MAHLNHFFVIVSILSLLAYCNNAQLSPNFYDTTCPNLQTIVRNAMGQAINREARLGASILRLFFHDCFVNGCDVSILLDDTTTFTGEKNAAPNRNSARGFEVIDTIKTNVEAACSATVSCADILALAARDGVVLPECSQQPNPSPFSDLSTLTSMFAAKGLSASDLTVLSGGHTIGQAQCQFFKTHIYNETNIDANFATTIRANCPASGGDTNLAPLDTLTPTCFDNSYYTDLVAQRGLLHSDQVLFNGGSQDALVRTYSTNNAAFFSDFAAAMVRMGNISPLTGTNGEIRRN. 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g04760 293 ProSitePatterns Peroxidases proximal heme-ligand signature. 165 175 IPR019793 -
Seca4g04760 293 SUPERFAMILY Heme-dependent peroxidases 24 293 IPR010255 GO:0004601|GO:0006979|GO:0020037
Seca4g04760 293 PRINTS Plant peroxidase signature 117 127 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca4g04760 293 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca4g04760 293 PRINTS Plant peroxidase signature 98 111 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca4g04760 293 PRINTS Plant peroxidase signature 272 285 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca4g04760 293 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca4g04760 293 PRINTS Plant peroxidase signature 232 249 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca4g04760 293 PRINTS Plant peroxidase signature 216 231 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca4g04760 293 ProSiteProfiles Plant heme peroxidase family profile. 24 293 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca4g04760 293 Gene3D - 142 293 - -
Seca4g04760 293 ProSitePatterns Peroxidases active site signature. 56 67 IPR019794 GO:0004601
Seca4g04760 293 PANTHER PEROXIDASE 72-RELATED 22 293 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca4g04760 293 Gene3D - 28 134 - -
Seca4g04760 293 Pfam Peroxidase 41 134 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca4g04760 293 Pfam Peroxidase 142 261 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca4g04760 293 FunFam Peroxidase 143 277 - -
Seca4g04760 293 Gene3D Peroxidase, domain 2 143 277 - -
Seca4g04760 293 PRINTS Haem peroxidase superfamily signature 165 180 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca4g04760 293 PRINTS Haem peroxidase superfamily signature 218 233 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca4g04760 293 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca4g04760 293 CDD secretory_peroxidase 24 293 IPR033905 GO:0004601|GO:0042744
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g04760 Seca-Chr4 88378956 88382377 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g04760 19 292 Peroxidase AT5G05340 60.678 3.50e-121 348
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g04760 K00430 - gmx:100810392 459.914