Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g04749 ATGGAGGAATTGTCAAAGATAGTCGTTCTTGGAAAACCTTTATGGCAACCCCAAAAAGGCCAAAAGTTTGAGATAATGGACAGAATTGAATATTTGAAACATTATTGTCCAACCGATGAAATGCTAAAGGGGATTATTAAAATGGTTGAGGTTGGAGAGAGTCAAGATTTACCAAGCTATGATTCGTTGCAAGTCGAATATGCTCCTTCACCAAAGGCAAGTTCAAGAGAACATGTCGAAACTGAAGCTTCACGAGATATCAGTTATGTTAAAATGAATCCAGTCAACCTCGTTCAATTACTTATGGATGTGAATGAATGGTCGAGATCATTTTATAATATTGTGGCAAGATCAACTGTCCTTGGAGTCTTTCTAAGTGGATTGGAAGGAAGCAATAATGGGAAATTGCAAGTGATAAATGCAGAATTTCAATTGCCTTCACCCTTTGCATCGACTTGGGAGTGTAATTTCGCAAGGTACTGTAAGAAGTTGACTCGTAATAAGTGGGCGGTGGTGGATTTTTCGTTAGAGAAGATTTTTCCTTCTCCAGCAAACAAATTTCGCAAAAGACCATCAGGTTGTTTGATTAAGAAAGTGGCAGATGGATACTCTAAGGTTATATGGGTTGAGCATTTGGTAGCAGACTATAGCGAATATAAAGATAAGTTCCGATCATTAGTCTCATCAGGTTTGGCCTTTGGTGCACCGCATTGGCTTGCTTGTTTAGTTCGTACCATTGAATGCTTTGAAACACTAAAAGCAAATCCTGTTCCCACATACTATGGAAGTAAGTATATTTATACCTTTTTCTTGAATTTATGCAACAAGTTGAATATTTCTTCAATGAAGTGA 852 0.3756 MEELSKIVVLGKPLWQPQKGQKFEIMDRIEYLKHYCPTDEMLKGIIKMVEVGESQDLPSYDSLQVEYAPSPKASSREHVETEASRDISYVKMNPVNLVQLLMDVNEWSRSFYNIVARSTVLGVFLSGLEGSNNGKLQVINAEFQLPSPFASTWECNFARYCKKLTRNKWAVVDFSLEKIFPSPANKFRKRPSGCLIKKVADGYSKVIWVEHLVADYSEYKDKFRSLVSSGLAFGAPHWLACLVRTIECFETLKANPVPTYYGSKYIYTFFLNLCNKLNISSMK. 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g04749 283 Pfam START domain 76 244 IPR002913 GO:0008289
Seca4g04749 283 SMART START_1 38 248 IPR002913 GO:0008289
Seca4g04749 283 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 1 259 IPR042160 -
Seca4g04749 283 ProSiteProfiles START domain profile. 1 251 IPR002913 GO:0008289
Seca4g04749 283 SUPERFAMILY Bet v1-like 82 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g04749 Seca-Chr4 88258261 88267153 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g04749 1 258 Homeobox Transcription Factor Family AT4G21750 39.535 2.70e-55 188
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g04749 K09338 - cave:132174546 239.195