Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g04743 ATGGCATTATCTCCAGAAAATCTTTCAAATTATACACTTCCAGGGATTACTTATGCGCACCCAAAGTTCTATATTGAACGGGAAAGTGACATTTTCATCATAACCTCAATTAATGTTGAGCCAGCTAAATCAAAAATTTGTGAACTTGCACAATCAGCTATGGAGGAATTGTCAAAGATAGTCATTCTTGGAAAACCTTTATGGCAACCCCAAAAAGGCCAAAAGTTTGAGATAATGGACAAAATTGAATATTTGAAACATTATTGTCCAACCGATGAAATGCTAAAAGGGATTATTAAAATGGCTGAGGTTGGAGAGAGTCAAGATTTACCAAGCTATGATTCGTTGCAAGTCGAATATGCTCCTTCACCAAAGGCAAGTTCAAGAGAACATGTCGAAACTGAAGCTTCACGAGATATCAGTTATGTTAAAATGAATCCAAATGAATGGTCGAGATCATTTTATAATATTGTGGCAAGATCAACTGTCCTTGGAGTCTTTCTAAGTGGATTGGAAGGAAGCAATGATGGGAAATTGCAAGTGATAAATGCAGAATTTCAATTGCCTTCACCCTTTGCATCGACTTGGGAGTGTAATTTCGCAGGTACTGTTATATGGGTTGAGCATTTGGTAGCAGACTATAGCGAATATAAAGATAAGTTCCGGTCATTAGTCTCCTCAGGTCTGGCCTTTGGTGCACCACGTTGGCTTGCTTGTTTAGTTCGTACCATTGAATGCTTTGAAACACTAAAAGCAAATTCTGTTCCCACATACTATGGAACTTGGATGACTCAAATGGGGCAAACAGGTCTCTTAAATTTGGCTGGAAGAAGGATGAGAATATTTTGTGCTGATATTAGTGCTTCCTCAATAAACCCATCTTGGACACAAGTTGCTTCACTTGCTCGTTCTCAAGATTTGATGATAAGGGTTAATAGCATTGTACAAGATTTTGGAAGGACAAAAGGTACCGCAGTGATCTTCTCTGCTTCTATTTCACTTCCAACCTCGCCTAGGCGATTATTTGACCACCTTCGTGATGTGAACTCTAGAAAGTGGCATGATGTTCAAGAACTCTTCTATGTTATTCAAGGCAATGATCCTAGGAATCGTGTCTCCATCATTCAAGCAAATCCTGGTTTGGGCTTGGCAGGTACACTTTTTGTACAAGAAAGTTACATGGACTCAACAGGCTCCTCCTTTGTGGTTTATTCTCATGTGGATAAGTTAGTTTTGACAAATGTTCTAAATGGAGCAAACCCAGACTTAGTGACCATGATGCCTTCAGGGTTTGCTATCCTTCCTGATGGGATGCCATCAAGTGATAATGATGTTGGTGGTGGTGGCTATGGAAGTATTCTAACTATTGCATACTACATGGTTCTAACTCTTACCGGTAATCCACTCTTCATACCTGATAACACAATGGATGTTTTCAAGCAACTTATTGTTAACACTGTCACTGATATAGAGAATGCGGTTCTCCATAATAATTCCTGA 1500 0.3913 MALSPENLSNYTLPGITYAHPKFYIERESDIFIITSINVEPAKSKICELAQSAMEELSKIVILGKPLWQPQKGQKFEIMDKIEYLKHYCPTDEMLKGIIKMAEVGESQDLPSYDSLQVEYAPSPKASSREHVETEASRDISYVKMNPNEWSRSFYNIVARSTVLGVFLSGLEGSNDGKLQVINAEFQLPSPFASTWECNFAGTVIWVEHLVADYSEYKDKFRSLVSSGLAFGAPRWLACLVRTIECFETLKANSVPTYYGTWMTQMGQTGLLNLAGRRMRIFCADISASSINPSWTQVASLARSQDLMIRVNSIVQDFGRTKGTAVIFSASISLPTSPRRLFDHLRDVNSRKWHDVQELFYVIQGNDPRNRVSIIQANPGLGLAGTLFVQESYMDSTGSSFVVYSHVDKLVLTNVLNGANPDLVTMMPSGFAILPDGMPSSDNDVGGGGYGSILTIAYYMVLTLTGNPLFIPDNTMDVFKQLIVNTVTDIENAVLHNNS. 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g04743 499 SUPERFAMILY Bet v1-like 266 459 - -
Seca4g04743 499 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 41 201 IPR042160 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g04743 Seca-Chr4 88182994 88194242 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g04743 30 462 Homeobox Transcription Factor Family AT4G04890 30.799 2.08e-60 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g04743 K09338 - cave:132174546 302.753