Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g04741 ATGTCAATTGGCTTAATTCTTATTTTGATACAAACAGCATGGATGACTCAAATGGGGCAAAAAGGTCTCTTAAATTTGGCTGGAAGAATGATGAGAATCTTTTGTGCTAATATTAATGCTTCCTCAATAAACCCATCTTGGACACAAGTTTCTTCACTTGCTAGTTCTCAAGATTTGATGATCAGGGTTAATAGCATTGTACAAGATTTTGGAAGGACAAAAGGCACCGCAGTGATCTTCCTTGCTTCTGTTTTGCTTCCAACCTCGCCTAGGCGATTATTTGACCACCTTCGTGATGTGAACTCTAGAAAGGCAATGATCCTAGGAATCGTGTCTCCATCATTCAAGCAGATTTTGGGCTTGGTAGATACACTTTTTGTACAAGAAAGTTACATAGACTCAACAGGCTCCTCCTTTGTGGTTTATTCTCATGTGGATAAGTTAGTTTTGACAAATGTTCTAAATGGAGCAAACCCAGACTTAGTGACCATGATGCCTTCAGGGTTTGCTATCCTTCCTGATGGGATGCCATCAAGTGATGATGATGTTGGTGGTGGTGGCTCTGGAAGTATTCTAACTATTGCATACTACATGGTTCTAACTCTTACCGGTAATCCACTCTTCATCCCTGATAACACAATGGATGTTTTCAAGCAACTTATTGCTAACACTGTCACTGATATAGAGAATGCAGTTCTCCATAATAATTCCTGA 714 0.3964 MSIGLILILIQTAWMTQMGQKGLLNLAGRMMRIFCANINASSINPSWTQVSSLASSQDLMIRVNSIVQDFGRTKGTAVIFLASVLLPTSPRRLFDHLRDVNSRKAMILGIVSPSFKQILGLVDTLFVQESYIDSTGSSFVVYSHVDKLVLTNVLNGANPDLVTMMPSGFAILPDGMPSSDDDVGGGGSGSILTIAYYMVLTLTGNPLFIPDNTMDVFKQLIANTVTDIENAVLHNNS. 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g04741 237 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 14 232 IPR042160 -
Seca4g04741 237 SUPERFAMILY Bet v1-like 17 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g04741 Seca-Chr4 88171711 88173498 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g04741 17 200 Homeobox Transcription Factor Family AT1G05230 35.922 1.39e-29 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g04741 K09338 - gsj:114374332 120.168