Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g04740 ATGGATGACGTAGGACTTAATCGAAGGGGAATTCAAGGAATTGAAGGCGAAAACCATGGTTTTAATGGAAATGAGGATGAACAGATGATGGGCAATTCTGAAAAGGGAGGCAGTTCTTCTAATGCATCTTTGAGGGCTAGAAAGATGCAAGGAAACACCCTATCGAGGATTGGTGATGCAGAAGTGAATTTTGAGCATTTCGAGACCATGGATGGTGCAGGACTTAATAGAAGGGGAATTCAAGGAATTGAAGGCGGAAACCATGGTTTTAATGGAAAAGAATATGGACAGCTGATGGGCAATTCTGAAAAGGGAGGTAGTTCTTCTAATGCATCTTTGAGGGCTAGAAAGATGCAAGGAAACACCCTATTGAGGATTGGTGATGCAGAACATTCTGAGGCCATGGATGGTGTAGGACTTAATAGAAGGGAAACTCAAGGAACTGAAGATGAAAACCATGGTTTTAACGAATATGAGGATGGACAGATGATGGGCAATTCTTCTAATGCACCTTTGAGAGCTAAAAAGATGCAGGGCAATACCCAATTGAGGATTGGTAATGCAGAAGTAAATTCCGAGAATGAATGGTCAAGATCATTTTATAATATTGTGGCAAGATCAACTGTCCTTGGAGTCTTTCTAAGTGGATTGGAAGGAAGCAATGATGGGAAATTGCAAGTGATAAATGCAGAATTTCAATTGCCTTCATCCTTTGCATCGACTTGGGAGTGTAATTTCGCAAGGTACTGTAAGAAGTTGACTCGTAATAAGTGGGTGGTGGTGGATTTTTCGTTAGAGAAGATTTTTCCTTCTCCAGCAAACAAATTTCGCAGAAGACCATCAGGTTGTTTGATTAAGAAAGTGGCAGATGGATACTCTAAGGATGTTTCCTTATCGATATGA 903 0.4064 MDDVGLNRRGIQGIEGENHGFNGNEDEQMMGNSEKGGSSSNASLRARKMQGNTLSRIGDAEVNFEHFETMDGAGLNRRGIQGIEGGNHGFNGKEYGQLMGNSEKGGSSSNASLRARKMQGNTLLRIGDAEHSEAMDGVGLNRRETQGTEDENHGFNEYEDGQMMGNSSNAPLRAKKMQGNTQLRIGNAEVNSENEWSRSFYNIVARSTVLGVFLSGLEGSNDGKLQVINAEFQLPSSFASTWECNFARYCKKLTRNKWVVVDFSLEKIFPSPANKFRRRPSGCLIKKVADGYSKDVSLSI. 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g04740 300 Pfam START domain 195 294 IPR002913 GO:0008289
Seca4g04740 300 MobiDBLite consensus disorder prediction 129 157 - -
Seca4g04740 300 SUPERFAMILY Bet v1-like 200 294 - -
Seca4g04740 300 MobiDBLite consensus disorder prediction 91 111 - -
Seca4g04740 300 MobiDBLite consensus disorder prediction 1 43 - -
Seca4g04740 300 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 193 294 IPR042160 -
Seca4g04740 300 MobiDBLite consensus disorder prediction 25 43 - -
Seca4g04740 300 MobiDBLite consensus disorder prediction 125 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g04740 Seca-Chr4 88153377 88163808 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g04740 194 294 Homeobox Transcription Factor Family AT4G21750 49.505 1.21e-27 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g04740 K09338 - qsu:111989412 110.538