Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g04738 ATGCCAGCAATCGCCGCCAAGCGCAGATTAAGATCTCACTCCCCGCCCACCCGCAAATCGCCCCGCCGATGCACCGCCGCAACCGCCCATTCCTCTGTAACCGAAAGTAAAATCGGCGCTGATGGAAACAAAGCACAATCGCTTGAACCCACAGTTGTGAAACCTCACTGGAATCCCAAAGATGGTGAGCAATTAAGGATGGTGAAGGAGGCATTGCACTTGTCCACTGCACCGTCTATTGTCGTTTGCCGTGAGGAGGAGCAGAATGTGGTTTTGGGGTTCTGTAGAAGGTGCATTGAACACGAGAAAGCTGGGAGTCTCTACATATGTGGGTGTCCTGGAACCGGGAAATCATTGTCTATGGAGAAAGTGAAAGAGCTTTTGCTCAACTGGGCTACTGAGGCAGGTTTCCCATTGCCAGATGTTGTATCTGTAAATTGTACATCCCTGGCCAGTACATCTGATATTTTCACTAAGATACTTGGGTTAAACAAAGCACTAGGAAAAAAGGTTTCAGGCACACCGTTACAGCAACTTCAGAACATATACTCTCAGAAATTGTCTGTCAAGAACATGATCTCCATTGTAACAGATTGA 597 0.4757 MPAIAAKRRLRSHSPPTRKSPRRCTAATAHSSVTESKIGADGNKAQSLEPTVVKPHWNPKDGEQLRMVKEALHLSTAPSIVVCREEEQNVVLGFCRRCIEHEKAGSLYICGCPGTGKSLSMEKVKELLLNWATEAGFPLPDVVSVNCTSLASTSDIFTKILGLNKALGKKVSGTPLQQLQNIYSQKLSVKNMISIVTD. 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g04738 198 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 71 183 IPR027417 -
Seca4g04738 198 MobiDBLite consensus disorder prediction 19 41 - -
Seca4g04738 198 MobiDBLite consensus disorder prediction 1 44 - -
Seca4g04738 198 Pfam AAA domain 102 183 IPR003593 GO:0016887
Seca4g04738 198 PANTHER CELL DIVISION CONTROL PROTEIN 6-RELATED 20 190 - -
Seca4g04738 198 Gene3D - 61 198 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g04738 Seca-Chr4 88111509 88114884 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g04738 14 198 Core DNA Replication Machinery Family AT2G29680 53.333 1.89e-57 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g04738 K02213 - gmx:100791200 292.352