Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g04733 ATGTTAGATCATCTAGAAAGTGTTTTGGCCAATGAGCCTGTTGCTGCAAAGAGTGGCCAGTTTATTGTTGAAGTGAAGCCCCAGGTATGTATAATTTCTGATGTGAGCAAAGGCTTAGTTGCTGAAAAGATATTTTCGTCAATGGCTGAATCAGATGAGGACATGTTTGAAATAGTTAGCAGTGCAATCTCGAGAAATATTCTTTCCACCAATGCTTCTGTATTTGCTTGCACGGTTGGTCAAAAACCTAGCAAAGCTAAGTATTATCTGGATGATACAACTGAAGTAACAAGCATGCTAGAATCATTGGCCGAAGAATCAGATTCTTCACCCTGCATAGAAGAAAGTGGGGATTCCTCTTGA 363 0.3994 MLDHLESVLANEPVAAKSGQFIVEVKPQVCIISDVSKGLVAEKIFSSMAESDEDMFEIVSSAISRNILSTNASVFACTVGQKPSKAKYYLDDTTEVTSMLESLAEESDSSPCIEESGDSS. 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g04733 120 Pfam Trehalose-phosphatase 2 93 IPR003337 GO:0003824|GO:0005992
Seca4g04733 120 SUPERFAMILY HAD-like 3 104 IPR036412 -
Seca4g04733 120 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 2 105 IPR001830 GO:0003824|GO:0005992
Seca4g04733 120 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 1 116 - -
Seca4g04733 120 Gene3D - 2 114 IPR023214 -
Seca4g04733 120 MobiDBLite consensus disorder prediction 101 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g04733 Seca-Chr4 88089104 88090376 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g04733 1 110 Trehalose Biosynthesis Gene Families AT1G06410 65.600 5.87e-44 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g04733 K16055 - gmx:100800847 194.512