Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g04709 ATGGCCACCTTCATTTTAAGGTCTAATAAAGCAGTCCATGCCTTGGGCTGGTTCTGCCTCCTTTTGATGGTGCAGAAGGGTGCTGCCTATGATTTCATAGTTGGGGGCCAAAAGGGTTGGAGTGTTCCAAGTGACCCCAATTTCAACCCTTTCAATCAATGGGCAGAGAAGAGCCGTTTTCAAATTGGAGACTCCCTAGTGTTCAACTACCAATCTGGCCAAGACTCAGTGCTTTATGTAAAGAGCGAAGACTATGCCAGTTGCAACACTGGCTCACCTTATGCAAAATTCTCTGATGGCCACACAGTCTTCAAACTAAACCAATCAGGGCCTCACTTTTTCATCAGTGGAAACAAAGACAACTGTCTCAAAAATGAGAAGTTAACAGTGATTGTGCTAGCTGATAGAAGCAACCGCAGCTCATCAAACAACAACCAAACAAGCACTGCTTCTCCACCCTCACCACAGTCATCAACCCCTTCACCAGCACCTTCTCAGCAAGAGGGTCAATCTCCACCTCCAGATCAGACAAACTCAACACCAGCTCCTGTCAGTGAACCTCCACCTCCTAATGGTGCTGCTTCAGTCTTTGTCAGCTTTGTAGGCTCTGTTGCAACATTCATGGCTTCAATTCTAATTTTATCTCTCTAA 651 0.4578 MATFILRSNKAVHALGWFCLLLMVQKGAAYDFIVGGQKGWSVPSDPNFNPFNQWAEKSRFQIGDSLVFNYQSGQDSVLYVKSEDYASCNTGSPYAKFSDGHTVFKLNQSGPHFFISGNKDNCLKNEKLTVIVLADRSNRSSSNNNQTSTASPPSPQSSTPSPAPSQQEGQSPPPDQTNSTPAPVSEPPPPNGAASVFVSFVGSVATFMASILILSL. 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g04709 216 PANTHER BLUE COPPER PROTEIN 29 151 IPR039391 GO:0009055
Seca4g04709 216 CDD OsENODL1_like 30 133 IPR041846 -
Seca4g04709 216 ProSiteProfiles Phytocyanin domain profile. 30 134 IPR003245 GO:0009055
Seca4g04709 216 MobiDBLite consensus disorder prediction 176 190 - -
Seca4g04709 216 MobiDBLite consensus disorder prediction 134 154 - -
Seca4g04709 216 SUPERFAMILY Cupredoxins 29 133 IPR008972 -
Seca4g04709 216 MobiDBLite consensus disorder prediction 134 193 - -
Seca4g04709 216 MobiDBLite consensus disorder prediction 161 175 - -
Seca4g04709 216 FunFam Early nodulin-like protein 9 30 145 - -
Seca4g04709 216 Pfam Plastocyanin-like domain 40 124 IPR003245 GO:0009055
Seca4g04709 216 Gene3D - 30 146 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g04709 Seca-Chr4 87603244 87605184 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g04709 14 201 Phytocyanin Superfamily AT3G20570 51.064 2.30e-52 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g04709 - - gmx:100792916 321.242
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g04709 4 87603244 87605184 Seca4g04709 4 87603244 87605184 ECH