Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g04698 ATGTCTGAATTAGACGCTCAGATTCCTACTGCCTTCGATCCTTTTGCTGAGGCAAATGCTGACGACTCGGGTGCGGGGTCAAAGGATTATGTGCATATTCGCATACAGCAAAGAAATGGCAGGAAAAGCCTGACAACTGTTCAGGGATTGAAGAAAGAATTCAGCTATAACAAGATACTTAAAGACCTTAAGAAAGAGTTCTGTTGCAATGGTACAGTTGTTCAGGACCCAGAACTTGGACAGGTTATTCAACTTCAAGGTGATCAGCGGAAGAATGTTTCTACCTTCCTAGTCCAGGTAACTATAACCTTAACTTTGTGTTATGTAGTAAGTATGTTGTCCTAA 345 0.4145 MSELDAQIPTAFDPFAEANADDSGAGSKDYVHIRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQVTITLTLCYVVSMLS. 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g04698 114 Gene3D - 2 109 - -
Seca4g04698 114 MobiDBLite consensus disorder prediction 1 26 - -
Seca4g04698 114 PIRSF Transl_init_SUI1_Euk 1 110 IPR005874 GO:0003743
Seca4g04698 114 Pfam Translation initiation factor SUI1 28 99 IPR001950 GO:0003743|GO:0006413
Seca4g04698 114 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 8 101 - -
Seca4g04698 114 FunFam Eukaryotic translation initiation factor SUI1 2 106 - -
Seca4g04698 114 SUPERFAMILY eIF1-like 4 102 IPR036877 GO:0003743|GO:0006413
Seca4g04698 114 CDD eIF1_SUI1 29 102 IPR005874 GO:0003743
Seca4g04698 114 NCBIfam translation initiation factor SUI1 6 102 IPR005874 GO:0003743
Seca4g04698 114 ProSiteProfiles Translation initiation factor SUI1 family profile. 31 101 IPR001950 GO:0003743|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g04698 Seca-Chr4 87451326 87453763 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g04698 1 102 Eukaryotic Initiation Factors Gene Family AT4G27130 87.255 9.78e-66 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g04698 K03113 - pcin:129312453 198.749